PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

7526
Candidate Protein Records
5906
Pathway-Level Records
16043
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pcabscaffold_11340067370.1 Alkaloid GES medium pass
Pcabscaffold_11340067380.1 Alkaloid GES medium pass
Pcabscaffold_1170080170.1 Alkaloid GES low borderline
Pcabscaffold_11840084850.1 Alkaloid GES medium pass
Pcabscaffold_11840084860.1 Alkaloid GES medium pass
Pcabscaffold_11890085870.1 Alkaloid GES medium pass
Pcabscaffold_118_1-11863150086110.1 Alkaloid GES medium pass
Pcabscaffold_118_1195083-18067710087120.1 Alkaloid GES medium pass
Pcabscaffold_12420108460.1 Alkaloid GES medium pass
Pcabscaffold_12470109290.1 Alkaloid GES low borderline
Pcabscaffold_12470109320.1 Alkaloid GES medium pass
Pcabscaffold_12470109330.1 Alkaloid GES medium pass
Pcabscaffold_12550114150.1 Alkaloid GES low borderline
Pcabscaffold_1260116060.1 Alkaloid GES low borderline
Pcabscaffold_1260116070.1 Alkaloid GES low borderline
Pcabscaffold_1260116090.1 Alkaloid GES medium pass
Pcabscaffold_1260116100.1 Alkaloid GES medium pass
Pcabscaffold_13480153710.1 Alkaloid GES medium pass
Pcabscaffold_135630158290.1 Alkaloid GES medium pass
Pcabscaffold_15130227780.1 Alkaloid GES low borderline
Pcabscaffold_15130227800.1 Alkaloid GES medium pass
Pcabscaffold_15130227810.1 Alkaloid GES medium pass
Pcabscaffold_15130227820.1 Alkaloid GES medium pass
Pcabscaffold_1520229300.1 Alkaloid GES low borderline
Pcabscaffold_15430236800.1 Alkaloid GES low borderline
Pcabscaffold_15430236810.1 Alkaloid GES medium pass
Pcabscaffold_1550239200.1 Alkaloid GES medium pass
Pcabscaffold_1550239210.1 Alkaloid GES medium pass
Pcabscaffold_15580241600.1 Alkaloid GES medium pass
Pcabscaffold_159_1-16866950255440.1 Alkaloid GES medium pass
Pcabscaffold_159_1-16866950255450.1 Alkaloid GES low borderline
Pcabscaffold_159_1-16866950255480.1 Alkaloid GES low borderline
Pcabscaffold_160257300.1 Alkaloid GES low borderline
Pcabscaffold_160257310.1 Alkaloid GES medium pass
Pcabscaffold_16380271190.1 Alkaloid GES medium pass
Pcabscaffold_16380271200.1 Alkaloid GES medium pass
Pcabscaffold_16380271210.1 Alkaloid GES medium pass
Pcabscaffold_17110292620.1 Alkaloid GES medium pass
Pcabscaffold_1720294210.1 Alkaloid GES medium pass
Pcabscaffold_17230296060.1 Alkaloid GES medium pass
Pcabscaffold_176_364117-14023400306380.1 Alkaloid GES low borderline
Pcabscaffold_18100324440.1 Alkaloid GES medium pass
Pcabscaffold_1820327740.1 Alkaloid GES medium pass
Pcabscaffold_183_1-15130170330080.1 Alkaloid GES medium pass
Pcabscaffold_183_1-15130170330100.1 Alkaloid GES low borderline
Pcabscaffold_183_1-15130170330110.1 Alkaloid GES medium pass
Pcabscaffold_19280355500.1 Alkaloid GES low borderline
Pcabscaffold_1930356440.1 Alkaloid GES low borderline
Pcabscaffold_19480362050.1 Alkaloid GES medium pass
Pcabscaffold_19550364180.1 Alkaloid GES medium pass