PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

5906
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Pcabscaffold_10700042510.1 Alkaloid 7DLGT low borderline
Pcabscaffold_10700042650.1 Alkaloid 7DLGT medium pass
Pcabscaffold_10740043720.1 Alkaloid 7DLGT low borderline
Pcabscaffold_10820046890.1 Alkaloid 7DLGT medium pass
Pcabscaffold_10850047330.1 Alkaloid 7DLGT low borderline
Pcabscaffold_10850047340.1 Alkaloid 7DLGT medium pass
Pcabscaffold_10990050920.1 Alkaloid 7DLGT medium pass
Pcabscaffold_11070054530.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1110056610.1 Alkaloid 7DLGT low borderline
Pcabscaffold_11110058440.1 Alkaloid 7DLGT low borderline
Pcabscaffold_11170059840.1 Alkaloid 7DLGT high pass
Pcabscaffold_11170059850.1 Alkaloid 7DLGT low borderline
Pcabscaffold_11170059860.1 Alkaloid 7DLGT low borderline
Pcabscaffold_11170059870.1 Alkaloid 7DLGT low borderline
Pcabscaffold_11170059890.1 Alkaloid 7DLGT low borderline
Pcabscaffold_11170059990.1 Alkaloid 7DLGT low borderline
Pcabscaffold_11170060220.1 Alkaloid 7DLGT medium pass
Pcabscaffold_11240061810.1 Alkaloid 7DLGT medium pass
Pcabscaffold_11240061820.1 Alkaloid 7DLGT medium pass
Pcabscaffold_1130065610.1 Alkaloid 7DLGT low borderline
Pcabscaffold_11400069010.1 Alkaloid 7DLGT low borderline
Pcabscaffold_11480071260.1 Alkaloid 7DLGT medium pass
Pcabscaffold_114_1-11005400071880.1 Alkaloid 7DLGT low borderline
Pcabscaffold_11890085900.1 Alkaloid 7DLGT high pass
Pcabscaffold_11890085910.1 Alkaloid 7DLGT medium pass
Pcabscaffold_11890085920.1 Alkaloid 7DLGT medium pass
Pcabscaffold_11890085930.1 Alkaloid 7DLGT high pass
Pcabscaffold_11890085940.1 Alkaloid 7DLGT medium pass
Pcabscaffold_11890085950.1 Alkaloid 7DLGT medium pass
Pcabscaffold_11890085960.1 Alkaloid 7DLGT medium pass
Pcabscaffold_11890085980.1 Alkaloid 7DLGT low borderline
Pcabscaffold_11890085990.1 Alkaloid 7DLGT high pass
Pcabscaffold_11890086000.1 Alkaloid 7DLGT high pass
Pcabscaffold_11890086020.1 Alkaloid 7DLGT medium pass
Pcabscaffold_11890086030.1 Alkaloid 7DLGT medium pass
Pcabscaffold_11890086040.1 Alkaloid 7DLGT medium pass
Pcabscaffold_11890086050.1 Alkaloid 7DLGT medium pass
Pcabscaffold_11890086060.1 Alkaloid 7DLGT high pass
Pcabscaffold_118_1-11863150086320.1 Alkaloid 7DLGT low borderline
Pcabscaffold_118_1-11863150086690.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1190088400.1 Alkaloid 7DLGT low borderline
Pcabscaffold_11950091050.1 Alkaloid 7DLGT low borderline
Pcabscaffold_1200094220.1 Alkaloid 7DLGT low borderline
Pcabscaffold_12160098370.1 Alkaloid 7DLGT low borderline
Pcabscaffold_12160098640.1 Alkaloid 7DLGT medium pass
Pcabscaffold_12170099060.1 Alkaloid 7DLGT low borderline
Pcabscaffold_12230100730.1 Alkaloid 7DLGT medium pass
Pcabscaffold_12230100740.1 Alkaloid 7DLGT medium pass
Pcabscaffold_12230100750.1 Alkaloid 7DLGT low borderline
Pcabscaffold_12230100780.1 Alkaloid 7DLGT medium pass