PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

7526
Candidate Protein Records
5906
Pathway-Level Records
16043
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pcabscaffold_17490302150.1 Terpenoid HDS/IspG high pass
Pcabscaffold_20820412220.1 Terpenoid HDS/IspG low borderline
Pcabscaffold_41790731810.1 Terpenoid HDS/IspG low borderline
Pcabscaffold_42210735660.1 Terpenoid HDS/IspG high pass
Pcabscaffold_429_1-8336930739640.1 Terpenoid HDS/IspG medium pass
Pcabscaffold_60881300.1 Terpenoid HDS/IspG medium pass
Pcabscaffold_640911020.1 Terpenoid HDS/IspG high pass
Pcabscaffold_7280957930.1 Terpenoid HDS/IspG low borderline
Pcabscaffold_82641021490.1 Terpenoid HDS/IspG low borderline
Pcabscaffold_10450029460.1 Terpenoid HMGR medium pass
Pcabscaffold_1280124050.1 Terpenoid HMGR medium pass
Pcabscaffold_1280124060.1 Terpenoid HMGR medium pass
Pcabscaffold_12880126450.1 Terpenoid HMGR medium pass
Pcabscaffold_150216640.1 Terpenoid HMGR medium pass
Pcabscaffold_161_179220-17084620265490.1 Terpenoid HMGR medium pass
Pcabscaffold_17420301150.1 Terpenoid HMGR medium pass
Pcabscaffold_20450403590.1 Terpenoid HMGR medium pass
Pcabscaffold_2490497360.1 Terpenoid HMGR medium pass
Pcabscaffold_350650940.1 Terpenoid HMGR medium pass
Pcabscaffold_36170665100.1 Terpenoid HMGR medium pass
Pcabscaffold_4_900905-60197250801550.1 Terpenoid HMGR medium pass
Pcabscaffold_5150823340.1 Terpenoid HMGR high pass
Pcabscaffold_5690857590.1 Terpenoid HMGR medium pass
Pcabscaffold_5690857600.1 Terpenoid HMGR medium pass
Pcabscaffold_5690857610.1 Terpenoid HMGR medium pass
Pcabscaffold_6290902430.1 Terpenoid HMGR medium pass
Pcabscaffold_710949530.1 Terpenoid HMGR medium pass
Pcabscaffold_7680979800.1 Terpenoid HMGR medium pass
Pcabscaffold_9661094410.1 Terpenoid HMGR low borderline
Pcabscaffold_9661094420.1 Terpenoid HMGR medium pass
Pcabscaffold_9661094430.1 Terpenoid HMGR medium pass
Pcabscaffold_9661094440.1 Terpenoid HMGR medium pass
Pcabscaffold_1110056970.1 Terpenoid HMGS high pass
Pcabscaffold_6430912220.1 Terpenoid HMGS high pass
Pcabscaffold_81002310.1 Terpenoid HMGS high pass
Pcabscaffold_12330104050.1 Terpenoid IDI medium pass
Pcabscaffold_1440196840.1 Terpenoid IDI medium pass
Pcabscaffold_16960286750.1 Terpenoid IDI medium pass
Pcabscaffold_1930356090.1 Terpenoid IDI medium pass
Pcabscaffold_27170542940.1 Terpenoid IDI medium pass
Pcabscaffold_29040572440.1 Terpenoid IDI medium pass
Pcabscaffold_9031062650.1 Terpenoid IDI medium pass
Pcabscaffold_931078980.1 Terpenoid IDI medium pass
Pcabscaffold_13630162810.1 Terpenoid MCT/IspD low borderline
Pcabscaffold_180317970.1 Terpenoid MCT/IspD low borderline
Pcabscaffold_190346480.1 Terpenoid MCT/IspD low borderline
Pcabscaffold_21900437980.1 Terpenoid MCT/IspD high pass
Pcabscaffold_36620668950.1 Terpenoid MCT/IspD low borderline
Pcabscaffold_3700673290.1 Terpenoid MCT/IspD low borderline
Pcabscaffold_390370695230.1 Terpenoid MCT/IspD low borderline