PlantSME Plant secondary metabolism enzyme database

Pogostemon cablin (pogostemon_cablin)

Imported from atlas release summary for Pogostemon cablin.

7526
Candidate Protein Records
5906
Pathway-Level Records
16043
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1976 22 UGT (631) View species results
Alkaloid pathway 1266 28 7DLGT (238) View species results
Phenylpropanoid pathway 1078 13 POD (387) View species results
Flavonoid pathway 742 15 UFGT (453) View species results
Rosmarinic acid pathway 534 7 C4H (262) View species results
Steroid pathway 310 16 CAS (110) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 6862 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 1086 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Pcabscaffold_9841101120.1 Alkaloid T3O medium borderline
Pcabscaffold_9841101130.1 Alkaloid T3O medium borderline
Pcabscaffold_9841101140.1 Alkaloid T3O medium borderline
Pcabscaffold_14700207040.1 Alkaloid TDC low borderline
Pcabscaffold_1680283690.1 Alkaloid TDC low borderline
Pcabscaffold_17460301600.1 Alkaloid TDC medium borderline
Pcabscaffold_1780311520.1 Alkaloid TDC low borderline
Pcabscaffold_19660365290.1 Alkaloid TDC low borderline
Pcabscaffold_2230446780.1 Alkaloid TDC low borderline
Pcabscaffold_2560507580.1 Alkaloid TDC medium borderline
Pcabscaffold_2600519020.1 Alkaloid TDC low borderline
Pcabscaffold_30780595790.1 Alkaloid TDC medium borderline
Pcabscaffold_3130603960.1 Alkaloid TDC low borderline
Pcabscaffold_3590659590.1 Alkaloid TDC low borderline
Pcabscaffold_5020813450.1 Alkaloid TDC low borderline
Pcabscaffold_51860824790.1 Alkaloid TDC low borderline
Pcabscaffold_5400842710.1 Alkaloid TDC low borderline
Pcabscaffold_5400842820.1 Alkaloid TDC low borderline
Pcabscaffold_540842420.1 Alkaloid TDC low borderline
Pcabscaffold_540842430.1 Alkaloid TDC low borderline
Pcabscaffold_540842530.1 Alkaloid TDC low borderline
Pcabscaffold_1000010540.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_1000012360.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_1000013270.1 Alkaloid TRI/TRII low borderline
Pcabscaffold_1000013280.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_104_324307-11158250031180.1 Alkaloid TRI/TRII low borderline
Pcabscaffold_106_1388106-21756310040690.1 Alkaloid TRI/TRII low borderline
Pcabscaffold_110051630.1 Alkaloid TRI/TRII low borderline
Pcabscaffold_111420059280.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_1150074110.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_1150074250.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_11560075430.1 Alkaloid TRI/TRII low borderline
Pcabscaffold_11620077900.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_11620077910.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_1210097080.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_122150099910.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_123_1-16801630106220.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_1260117950.1 Alkaloid TRI/TRII low borderline
Pcabscaffold_1270121240.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_12_923860-48109350132770.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_130590140430.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_131440143060.1 Alkaloid TRI/TRII low borderline
Pcabscaffold_13290147780.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_1400178470.1 Alkaloid TRI/TRII low borderline
Pcabscaffold_140175000.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_1420186760.1 Alkaloid TRI/TRII low borderline
Pcabscaffold_1420186770.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_1420186780.1 Alkaloid TRI/TRII medium pass
Pcabscaffold_14360191820.1 Alkaloid TRI/TRII low borderline
Pcabscaffold_1560242740.1 Alkaloid TRI/TRII low borderline