PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
Reset
Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold1910164130 Rosmarinic Acid 4CL low borderline
Csimscaffold19490168750 Rosmarinic Acid 4CL medium pass
Csimscaffold20050176700 Rosmarinic Acid 4CL low borderline
Csimscaffold2050183360 Rosmarinic Acid 4CL low borderline
Csimscaffold20780187540 Rosmarinic Acid 4CL medium pass
Csimscaffold210190580 Rosmarinic Acid 4CL low borderline
Csimscaffold21410195840 Rosmarinic Acid 4CL medium pass
Csimscaffold22310205220 Rosmarinic Acid 4CL low borderline
Csimscaffold23920222070 Rosmarinic Acid 4CL medium pass
Csimscaffold240222840 Rosmarinic Acid 4CL medium pass
Csimscaffold2560238260 Rosmarinic Acid 4CL low borderline
Csimscaffold26700248970 Rosmarinic Acid 4CL low borderline
Csimscaffold2750256590 Rosmarinic Acid 4CL medium pass
Csimscaffold27670257770 Rosmarinic Acid 4CL medium pass
Csimscaffold29120269880 Rosmarinic Acid 4CL medium pass
Csimscaffold29120269890 Rosmarinic Acid 4CL low borderline
Csimscaffold2970273470 Rosmarinic Acid 4CL low borderline
Csimscaffold30276280 Rosmarinic Acid 4CL medium pass
Csimscaffold3100284380 Rosmarinic Acid 4CL low borderline
Csimscaffold33050297220 Rosmarinic Acid 4CL low borderline
Csimscaffold33050297230 Rosmarinic Acid 4CL low borderline
Csimscaffold3620314830 Rosmarinic Acid 4CL medium pass
Csimscaffold3620314840 Rosmarinic Acid 4CL medium pass
Csimscaffold3620314850 Rosmarinic Acid 4CL medium pass
Csimscaffold3660317080 Rosmarinic Acid 4CL low borderline
Csimscaffold3850325810 Rosmarinic Acid 4CL medium pass
Csimscaffold4010335390 Rosmarinic Acid 4CL medium pass
Csimscaffold40333650 Rosmarinic Acid 4CL low borderline
Csimscaffold4500357480 Rosmarinic Acid 4CL medium pass
Csimscaffold4500357500 Rosmarinic Acid 4CL medium pass
Csimscaffold4500357510 Rosmarinic Acid 4CL medium pass
Csimscaffold4610361590 Rosmarinic Acid 4CL medium pass
Csimscaffold4780366760 Rosmarinic Acid 4CL medium pass
Csimscaffold4900371400 Rosmarinic Acid 4CL low borderline
Csimscaffold4950373020 Rosmarinic Acid 4CL medium pass
Csimscaffold4950373030 Rosmarinic Acid 4CL medium pass
Csimscaffold4950373040 Rosmarinic Acid 4CL medium pass
Csimscaffold5850401200 Rosmarinic Acid 4CL medium pass
Csimscaffold6110409560 Rosmarinic Acid 4CL low borderline
Csimscaffold6660424430 Rosmarinic Acid 4CL medium pass
Csimscaffold700436130 Rosmarinic Acid 4CL medium pass
Csimscaffold700436150 Rosmarinic Acid 4CL low borderline
Csimscaffold700436160 Rosmarinic Acid 4CL medium pass
Csimscaffold7280443440 Rosmarinic Acid 4CL low borderline
Csimscaffold7360445810 Rosmarinic Acid 4CL low borderline
Csimscaffold7420447540 Rosmarinic Acid 4CL medium pass
Csimscaffold7530450130 Rosmarinic Acid 4CL low borderline
Csimscaffold760451870 Rosmarinic Acid 4CL medium pass
Csimscaffold7620452420 Rosmarinic Acid 4CL low borderline
Csimscaffold7950460890 Rosmarinic Acid 4CL medium pass