PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold4150342130 Flavonoid F3H low borderline
Csimscaffold430348250 Flavonoid F3H medium borderline
Csimscaffold4340350220 Flavonoid F3H medium borderline
Csimscaffold43500350820 Flavonoid F3H medium borderline
Csimscaffold4430354760 Flavonoid F3H low borderline
Csimscaffold4570359810 Flavonoid F3H low borderline
Csimscaffold460360890 Flavonoid F3H medium borderline
Csimscaffold460360900 Flavonoid F3H medium borderline
Csimscaffold470364050 Flavonoid F3H low borderline
Csimscaffold470364060 Flavonoid F3H low borderline
Csimscaffold470364280 Flavonoid F3H medium borderline
Csimscaffold4790367190 Flavonoid F3H medium borderline
Csimscaffold4960373150 Flavonoid F3H medium borderline
Csimscaffold4970373520 Flavonoid F3H medium borderline
Csimscaffold4970373640 Flavonoid F3H medium borderline
Csimscaffold500375150 Flavonoid F3H medium borderline
Csimscaffold500375170 Flavonoid F3H medium borderline
Csimscaffold50374490 Flavonoid F3H low borderline
Csimscaffold5050376890 Flavonoid F3H low borderline
Csimscaffold5060377030 Flavonoid F3H low borderline
Csimscaffold5120379730 Flavonoid F3H medium borderline
Csimscaffold5240383060 Flavonoid F3H medium borderline
Csimscaffold5300385350 Flavonoid F3H medium borderline
Csimscaffold5540392390 Flavonoid F3H medium pass
Csimscaffold5630394850 Flavonoid F3H medium borderline
Csimscaffold5740398060 Flavonoid F3H medium borderline
Csimscaffold5950404420 Flavonoid F3H medium borderline
Csimscaffold6320415450 Flavonoid F3H medium borderline
Csimscaffold6480419280 Flavonoid F3H medium borderline
Csimscaffold6750427410 Flavonoid F3H medium borderline
Csimscaffold6750427420 Flavonoid F3H medium borderline
Csimscaffold6750427430 Flavonoid F3H medium borderline
Csimscaffold6750427440 Flavonoid F3H medium borderline
Csimscaffold70434850 Flavonoid F3H low borderline
Csimscaffold7080438100 Flavonoid F3H medium borderline
Csimscaffold7120439470 Flavonoid F3H medium borderline
Csimscaffold7470448640 Flavonoid F3H medium borderline
Csimscaffold7470448650 Flavonoid F3H medium borderline
Csimscaffold7680453940 Flavonoid F3H medium borderline
Csimscaffold80462560 Flavonoid F3H medium pass
Csimscaffold8060464760 Flavonoid F3H medium borderline
Csimscaffold8240468930 Flavonoid F3H medium borderline
Csimscaffold830470360 Flavonoid F3H medium borderline
Csimscaffold8530476090 Flavonoid F3H medium borderline
Csimscaffold8620478200 Flavonoid F3H low borderline
Csimscaffold8700480350 Flavonoid F3H low borderline
Csimscaffold870480000 Flavonoid F3H medium borderline
Csimscaffold890484680 Flavonoid F3H medium borderline
Csimscaffold940497900 Flavonoid F3H medium borderline
Csimscaffold9630503870 Flavonoid F3H medium pass