PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold9650504270 Flavonoid F3H low borderline
Csimscaffold9910511060 Flavonoid F3H medium borderline
Csimscaffold1510107070 Flavonoid FLS low borderline
Csimscaffold17120137790 Flavonoid FLS low borderline
Csimscaffold18030149920 Flavonoid FLS medium borderline
Csimscaffold6240413190 Flavonoid FLS low borderline
Csimscaffold10410011350 Flavonoid FNS medium borderline
Csimscaffold13430073880 Flavonoid FNS low borderline
Csimscaffold13540076330 Flavonoid FNS medium borderline
Csimscaffold150104560 Flavonoid FNS medium borderline
Csimscaffold15030105750 Flavonoid FNS medium borderline
Csimscaffold15420112070 Flavonoid FNS medium borderline
Csimscaffold16320126140 Flavonoid FNS medium borderline
Csimscaffold17000136160 Flavonoid FNS medium borderline
Csimscaffold17290139800 Flavonoid FNS medium borderline
Csimscaffold17490142290 Flavonoid FNS medium borderline
Csimscaffold17490142300 Flavonoid FNS medium borderline
Csimscaffold17490142310 Flavonoid FNS medium borderline
Csimscaffold190162670 Flavonoid FNS medium borderline
Csimscaffold1920165340 Flavonoid FNS medium borderline
Csimscaffold2110192590 Flavonoid FNS low borderline
Csimscaffold24870231610 Flavonoid FNS medium borderline
Csimscaffold29980275430 Flavonoid FNS medium borderline
Csimscaffold30650281380 Flavonoid FNS medium borderline
Csimscaffold30650281390 Flavonoid FNS medium borderline
Csimscaffold31710288630 Flavonoid FNS medium borderline
Csimscaffold3180289010 Flavonoid FNS medium borderline
Csimscaffold35530311610 Flavonoid FNS medium borderline
Csimscaffold4160342380 Flavonoid FNS low borderline
Csimscaffold4420354370 Flavonoid FNS medium borderline
Csimscaffold460361020 Flavonoid FNS medium borderline
Csimscaffold460361050 Flavonoid FNS medium borderline
Csimscaffold460361070 Flavonoid FNS medium borderline
Csimscaffold5240383160 Flavonoid FNS low borderline
Csimscaffold5290384260 Flavonoid FNS medium borderline
Csimscaffold6120409600 Flavonoid FNS medium borderline
Csimscaffold6120409650 Flavonoid FNS medium borderline
Csimscaffold6440418550 Flavonoid FNS medium borderline
Csimscaffold6600423420 Flavonoid FNS low borderline
Csimscaffold6690425380 Flavonoid FNS medium borderline
Csimscaffold770454480 Flavonoid FNS medium borderline
Csimscaffold830470600 Flavonoid FNS medium borderline
Csimscaffold8840483380 Flavonoid FNS low borderline
Csimscaffold9140492160 Flavonoid FNS medium borderline
Csimscaffold9300496350 Flavonoid FNS medium borderline
Csimscaffold9570502350 Flavonoid FNS medium borderline
Csimscaffold11740040310 Flavonoid IFR low borderline
Csimscaffold1400087290 Flavonoid IFR low borderline
Csimscaffold1490102780 Flavonoid IFR high pass
Csimscaffold1490102820 Flavonoid IFR low borderline