PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold10000530 Steroid FK medium pass
Csimscaffold10000540 Steroid FK medium pass
Csimscaffold10890020870 Steroid FK low borderline
Csimscaffold10890020880 Steroid FK medium pass
Csimscaffold11280029440 Steroid HYD1 medium pass
Csimscaffold3100284500 Steroid HYD1 low borderline
Csimscaffold7840458360 Steroid HYD1 medium pass
Csimscaffold9200494250 Steroid HYD1 high pass
Csimscaffold10410011320 Steroid ROT3/CYP90C1 medium borderline
Csimscaffold10410011340 Steroid ROT3/CYP90C1 medium borderline
Csimscaffold10410011360 Steroid ROT3/CYP90C1 medium borderline
Csimscaffold14950103460 Steroid ROT3/CYP90C1 low borderline
Csimscaffold1690133980 Steroid ROT3/CYP90C1 medium borderline
Csimscaffold2200202010 Steroid ROT3/CYP90C1 medium borderline
Csimscaffold4130341080 Steroid ROT3/CYP90C1 medium borderline
Csimscaffold4670363220 Steroid ROT3/CYP90C1 medium borderline
Csimscaffold4770366530 Steroid ROT3/CYP90C1 medium borderline
Csimscaffold580399660 Steroid ROT3/CYP90C1 medium borderline
Csimscaffold580399670 Steroid ROT3/CYP90C1 medium borderline
Csimscaffold6740427310 Steroid ROT3/CYP90C1 medium borderline
Csimscaffold8810482930 Steroid ROT3/CYP90C1 medium borderline
Csimscaffold9160492440 Steroid ROT3/CYP90C1 medium borderline
Csimscaffold960502820 Steroid ROT3/CYP90C1 medium borderline
Csimscaffold9810508370 Steroid ROT3/CYP90C1 low borderline
Csimscaffold13270070440 Steroid SMO1/SMO2 medium pass
Csimscaffold27070252620 Steroid SMO1/SMO2 medium pass
Csimscaffold3400303080 Steroid SMO1/SMO2 medium pass
Csimscaffold4720365220 Steroid SMO1/SMO2 medium pass
Csimscaffold530385220 Steroid SMO1/SMO2 medium pass
Csimscaffold6960433810 Steroid SMO1/SMO2 medium pass
Csimscaffold10090003720 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold1010004210 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold1010004280 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold10520013430 Steroid SMT1/SMT2/SMT3 low borderline
Csimscaffold10730017910 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold1120027600 Steroid SMT1/SMT2/SMT3 low borderline
Csimscaffold1120027610 Steroid SMT1/SMT2/SMT3 low borderline
Csimscaffold11440032760 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold11440032770 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold11440032780 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold1160036040 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold1160036300 Steroid SMT1/SMT2/SMT3 low borderline
Csimscaffold1160036320 Steroid SMT1/SMT2/SMT3 low borderline
Csimscaffold11730040140 Steroid SMT1/SMT2/SMT3 low borderline
Csimscaffold11910044370 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold1280061090 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold13020066140 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold1360077600 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold13690079960 Steroid SMT1/SMT2/SMT3 medium pass
Csimscaffold13920085080 Steroid SMT1/SMT2/SMT3 medium pass