PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold5790399600 Steroid DWF4/CYP90B1 low borderline
Csimscaffold590402450 Steroid DWF4/CYP90B1 low borderline
Csimscaffold5920403680 Steroid DWF4/CYP90B1 low borderline
Csimscaffold5920403700 Steroid DWF4/CYP90B1 low borderline
Csimscaffold6030407360 Steroid DWF4/CYP90B1 low borderline
Csimscaffold6050407870 Steroid DWF4/CYP90B1 low borderline
Csimscaffold6180411060 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold6230412710 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold6500420460 Steroid DWF4/CYP90B1 low borderline
Csimscaffold6690425380 Steroid DWF4/CYP90B1 low borderline
Csimscaffold7020436990 Steroid DWF4/CYP90B1 low borderline
Csimscaffold7220442050 Steroid DWF4/CYP90B1 low borderline
Csimscaffold740446850 Steroid DWF4/CYP90B1 low borderline
Csimscaffold7700454870 Steroid DWF4/CYP90B1 low borderline
Csimscaffold7840458250 Steroid DWF4/CYP90B1 low borderline
Csimscaffold7980461350 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold7980461380 Steroid DWF4/CYP90B1 low borderline
Csimscaffold7980461390 Steroid DWF4/CYP90B1 low borderline
Csimscaffold8160467070 Steroid DWF4/CYP90B1 low borderline
Csimscaffold8190467620 Steroid DWF4/CYP90B1 low borderline
Csimscaffold8190467630 Steroid DWF4/CYP90B1 low borderline
Csimscaffold8200468200 Steroid DWF4/CYP90B1 low borderline
Csimscaffold8240468880 Steroid DWF4/CYP90B1 low borderline
Csimscaffold8280469620 Steroid DWF4/CYP90B1 low borderline
Csimscaffold8610478120 Steroid DWF4/CYP90B1 low borderline
Csimscaffold8660479180 Steroid DWF4/CYP90B1 low borderline
Csimscaffold8910485040 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold8910485050 Steroid DWF4/CYP90B1 low borderline
Csimscaffold9140492180 Steroid DWF4/CYP90B1 low borderline
Csimscaffold9280495670 Steroid DWF4/CYP90B1 low borderline
Csimscaffold9280495680 Steroid DWF4/CYP90B1 low borderline
Csimscaffold9280495710 Steroid DWF4/CYP90B1 low borderline
Csimscaffold9520501230 Steroid DWF4/CYP90B1 low borderline
Csimscaffold9570502360 Steroid DWF4/CYP90B1 low borderline
Csimscaffold9580502420 Steroid DWF4/CYP90B1 low borderline
Csimscaffold960502830 Steroid DWF4/CYP90B1 low borderline
Csimscaffold960502870 Steroid DWF4/CYP90B1 low borderline
Csimscaffold9800508260 Steroid DWF4/CYP90B1 low borderline
Csimscaffold9810508350 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold9930511220 Steroid DWF4/CYP90B1 low borderline
Csimscaffold18350154340 Steroid DWF5 medium pass
Csimscaffold18350154350 Steroid DWF5 medium borderline
Csimscaffold7860458640 Steroid DWF5 medium pass
Csimscaffold12210050950 Steroid DWF7 low borderline
Csimscaffold1640126980 Steroid DWF7 medium pass
Csimscaffold20890189140 Steroid DWF7 low borderline
Csimscaffold25890240730 Steroid DWF7 low borderline
Csimscaffold6760427990 Steroid DWF7 medium pass
Csimscaffold6990434500 Steroid DWF7 low borderline
Csimscaffold7850458510 Steroid DWF7 low borderline