PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold7020437000 Terpenoid CYP71 medium borderline
Csimscaffold7980461350 Terpenoid CYP71 medium borderline
Csimscaffold7980461380 Terpenoid CYP71 medium borderline
Csimscaffold7980461390 Terpenoid CYP71 medium borderline
Csimscaffold8240468910 Terpenoid CYP71 low borderline
Csimscaffold8280469570 Terpenoid CYP71 medium pass
Csimscaffold8910485040 Terpenoid CYP71 medium borderline
Csimscaffold8910485050 Terpenoid CYP71 medium pass
Csimscaffold90486980 Terpenoid CYP71 medium pass
Csimscaffold90487790 Terpenoid CYP71 medium pass
Csimscaffold90487800 Terpenoid CYP71 medium pass
Csimscaffold9140492180 Terpenoid CYP71 medium borderline
Csimscaffold9300496360 Terpenoid CYP71 low borderline
Csimscaffold9510501050 Terpenoid CYP71 medium borderline
Csimscaffold9700505750 Terpenoid CYP71 medium borderline
Csimscaffold10220006970 Terpenoid CYP76 medium borderline
Csimscaffold10260007840 Terpenoid CYP76 medium pass
Csimscaffold10410011320 Terpenoid CYP76 medium borderline
Csimscaffold10410011340 Terpenoid CYP76 medium borderline
Csimscaffold10410011350 Terpenoid CYP76 medium pass
Csimscaffold10410011360 Terpenoid CYP76 medium borderline
Csimscaffold10550013880 Terpenoid CYP76 medium borderline
Csimscaffold10550013890 Terpenoid CYP76 medium borderline
Csimscaffold1080019030 Terpenoid CYP76 medium borderline
Csimscaffold1080019040 Terpenoid CYP76 low borderline
Csimscaffold10870020280 Terpenoid CYP76 medium borderline
Csimscaffold1090020920 Terpenoid CYP76 low borderline
Csimscaffold1090021150 Terpenoid CYP76 medium pass
Csimscaffold11150026560 Terpenoid CYP76 medium pass
Csimscaffold11150026570 Terpenoid CYP76 low borderline
Csimscaffold1150034150 Terpenoid CYP76 medium pass
Csimscaffold11540035150 Terpenoid CYP76 medium borderline
Csimscaffold11690038460 Terpenoid CYP76 medium pass
Csimscaffold11690038470 Terpenoid CYP76 medium pass
Csimscaffold11700039170 Terpenoid CYP76 medium pass
Csimscaffold11940044920 Terpenoid CYP76 low borderline
Csimscaffold120046240 Terpenoid CYP76 medium borderline
Csimscaffold120046260 Terpenoid CYP76 medium borderline
Csimscaffold120046280 Terpenoid CYP76 medium pass
Csimscaffold12240051390 Terpenoid CYP76 medium borderline
Csimscaffold12240051400 Terpenoid CYP76 low borderline
Csimscaffold1240054030 Terpenoid CYP76 medium borderline
Csimscaffold12590057330 Terpenoid CYP76 medium borderline
Csimscaffold12590057340 Terpenoid CYP76 medium borderline
Csimscaffold12760060510 Terpenoid CYP76 medium pass
Csimscaffold12800061330 Terpenoid CYP76 medium borderline
Csimscaffold13180068960 Terpenoid CYP76 low borderline
Csimscaffold13180068980 Terpenoid CYP76 low borderline
Csimscaffold13180069000 Terpenoid CYP76 medium borderline
Csimscaffold13180069020 Terpenoid CYP76 medium pass