PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold13450074270 Terpenoid CYP76 medium borderline
Csimscaffold13450074310 Terpenoid CYP76 medium pass
Csimscaffold13540076330 Terpenoid CYP76 medium pass
Csimscaffold13550076660 Terpenoid CYP76 medium pass
Csimscaffold1390084750 Terpenoid CYP76 medium pass
Csimscaffold14360093500 Terpenoid CYP76 medium borderline
Csimscaffold14770100380 Terpenoid CYP76 medium pass
Csimscaffold14850101790 Terpenoid CYP76 low borderline
Csimscaffold150104560 Terpenoid CYP76 low borderline
Csimscaffold15030105750 Terpenoid CYP76 low borderline
Csimscaffold15300110390 Terpenoid CYP76 medium pass
Csimscaffold15300110400 Terpenoid CYP76 low borderline
Csimscaffold15530113670 Terpenoid CYP76 medium borderline
Csimscaffold15860118580 Terpenoid CYP76 medium borderline
Csimscaffold1620124110 Terpenoid CYP76 medium borderline
Csimscaffold16320126140 Terpenoid CYP76 medium borderline
Csimscaffold1660129890 Terpenoid CYP76 low borderline
Csimscaffold16850133170 Terpenoid CYP76 medium borderline
Csimscaffold17970148250 Terpenoid CYP76 medium pass
Csimscaffold1800149570 Terpenoid CYP76 medium pass
Csimscaffold1820152320 Terpenoid CYP76 low borderline
Csimscaffold18250153170 Terpenoid CYP76 medium pass
Csimscaffold1830153920 Terpenoid CYP76 medium borderline
Csimscaffold18520156470 Terpenoid CYP76 low borderline
Csimscaffold18780159370 Terpenoid CYP76 medium borderline
Csimscaffold18780159380 Terpenoid CYP76 medium borderline
Csimscaffold190162670 Terpenoid CYP76 medium pass
Csimscaffold19130164790 Terpenoid CYP76 medium pass
Csimscaffold19830172920 Terpenoid CYP76 medium borderline
Csimscaffold20170178490 Terpenoid CYP76 low borderline
Csimscaffold21130192850 Terpenoid CYP76 medium borderline
Csimscaffold21130192860 Terpenoid CYP76 medium pass
Csimscaffold21130192870 Terpenoid CYP76 medium borderline
Csimscaffold21130192890 Terpenoid CYP76 medium borderline
Csimscaffold21320194860 Terpenoid CYP76 low borderline
Csimscaffold21610197630 Terpenoid CYP76 medium pass
Csimscaffold21760198910 Terpenoid CYP76 medium borderline
Csimscaffold2200202010 Terpenoid CYP76 low borderline
Csimscaffold2200202020 Terpenoid CYP76 low borderline
Csimscaffold22030202370 Terpenoid CYP76 medium pass
Csimscaffold22030202380 Terpenoid CYP76 medium pass
Csimscaffold22300205170 Terpenoid CYP76 medium pass
Csimscaffold22300205180 Terpenoid CYP76 low borderline
Csimscaffold22300205190 Terpenoid CYP76 medium pass
Csimscaffold22530207470 Terpenoid CYP76 medium pass
Csimscaffold2280209860 Terpenoid CYP76 medium pass
Csimscaffold22870210390 Terpenoid CYP76 medium pass
Csimscaffold22870210400 Terpenoid CYP76 medium pass
Csimscaffold2330216030 Terpenoid CYP76 medium pass
Csimscaffold23330216350 Terpenoid CYP76 low borderline