PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Csimscaffold12140049390 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Csimscaffold12140049400 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
Csimscaffold12140049410 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Csimscaffold12140049420 Phenylpropanoid CCR medium borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
Csimscaffold1270059260 Phenylpropanoid CCR medium borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
Csimscaffold1270059270 Phenylpropanoid CCR medium borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
Csimscaffold13750081480 Phenylpropanoid CCR medium pass CCR__00005__sp_Q0JKZ0_SNL6_ORYSJ
Csimscaffold140086540 Phenylpropanoid CCR low borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
Csimscaffold14110089180 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Csimscaffold16670130790 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
Csimscaffold1730140030 Phenylpropanoid CCR low borderline CCR__00004__sp_G7JEE5_CCR2_MEDTR
Csimscaffold17860146910 Phenylpropanoid CCR medium borderline CCR__00008__sp_Q9S9N9_CCR1_ARATH
Csimscaffold19370167370 Phenylpropanoid CCR medium pass CCR__00007__sp_Q9CA28_TKPR2_ARATH
Csimscaffold19840173010 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Csimscaffold21070192090 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
Csimscaffold24230226070 Phenylpropanoid CCR low borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
Csimscaffold26540247240 Phenylpropanoid CCR low borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Csimscaffold28010261480 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
Csimscaffold28010261490 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Csimscaffold310284070 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
Csimscaffold3110284920 Phenylpropanoid CCR medium pass CCR__00001__sp_A0A059TC02_CCR1_PETHY
Csimscaffold3490307520 Phenylpropanoid CCR medium pass CCR__00004__sp_G7JEE5_CCR2_MEDTR
Csimscaffold37250320150 Phenylpropanoid CCR medium borderline CCR__00006__sp_Q6K9A2_CCR1_ORYSJ
Csimscaffold4430354840 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
Csimscaffold46490362610 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
Csimscaffold4820368810 Phenylpropanoid CCR medium pass CCR__00004__sp_G7JEE5_CCR2_MEDTR
Csimscaffold490371210 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
Csimscaffold4970373820 Phenylpropanoid CCR low borderline CCR__00009__sp_Q9SAH9_CCR2_ARATH
Csimscaffold5480390700 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
Csimscaffold5480390710 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
Csimscaffold5480390720 Phenylpropanoid CCR medium borderline CCR__00007__sp_Q9CA28_TKPR2_ARATH
Csimscaffold5600394240 Phenylpropanoid CCR medium pass CCR__00004__sp_G7JEE5_CCR2_MEDTR
Csimscaffold570396820 Phenylpropanoid CCR medium pass CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
Csimscaffold6680424920 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
Csimscaffold6680424950 Phenylpropanoid CCR medium borderline CCR__00009__sp_Q9SAH9_CCR2_ARATH
Csimscaffold6680424960 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Csimscaffold6680424970 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
Csimscaffold6680424980 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
Csimscaffold6680424990 Phenylpropanoid CCR medium borderline CCR__00008__sp_Q9S9N9_CCR1_ARATH
Csimscaffold6680425000 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
Csimscaffold6680425010 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Csimscaffold6710426360 Phenylpropanoid CCR medium borderline CCR__00001__sp_A0A059TC02_CCR1_PETHY
Csimscaffold9790507630 Phenylpropanoid CCR medium borderline CCR__00002__sp_A0A072VDF2_CCR1_MEDTR
Csimscaffold11550035210 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold11550035220 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold11550035230 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold11550035240 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00004__sp_O49499_CAMT4_ARATH
Csimscaffold11720039460 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold11720039480 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00001__sp_A0A0S2UWA5_CAMT3_PETHY
Csimscaffold11860043150 Phenylpropanoid CCoAOMT medium pass CCoAOMT__00003__sp_A0A0S2UWT1_CAMT2_PETHY