PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold4500357600 Phenylpropanoid CAD medium pass
Csimscaffold4800368350 Phenylpropanoid CAD medium pass
Csimscaffold4970373420 Phenylpropanoid CAD low borderline
Csimscaffold5530392090 Phenylpropanoid CAD low borderline
Csimscaffold5530392110 Phenylpropanoid CAD low borderline
Csimscaffold5570393090 Phenylpropanoid CAD medium pass
Csimscaffold5570393100 Phenylpropanoid CAD medium pass
Csimscaffold5570393120 Phenylpropanoid CAD medium pass
Csimscaffold5570393130 Phenylpropanoid CAD medium pass
Csimscaffold5570393140 Phenylpropanoid CAD medium pass
Csimscaffold5570393160 Phenylpropanoid CAD medium pass
Csimscaffold5970405150 Phenylpropanoid CAD low borderline
Csimscaffold620411530 Phenylpropanoid CAD low borderline
Csimscaffold6470419060 Phenylpropanoid CAD medium borderline
Csimscaffold6470419070 Phenylpropanoid CAD medium borderline
Csimscaffold6830430120 Phenylpropanoid CAD medium pass
Csimscaffold6830430150 Phenylpropanoid CAD medium pass
Csimscaffold6830430160 Phenylpropanoid CAD medium pass
Csimscaffold6830430170 Phenylpropanoid CAD medium pass
Csimscaffold6830430180 Phenylpropanoid CAD medium pass
Csimscaffold7100438900 Phenylpropanoid CAD low borderline
Csimscaffold7580451330 Phenylpropanoid CAD medium pass
Csimscaffold8070464770 Phenylpropanoid CAD low borderline
Csimscaffold8250469120 Phenylpropanoid CAD low borderline
Csimscaffold900488110 Phenylpropanoid CAD medium pass
Csimscaffold900488120 Phenylpropanoid CAD medium pass
Csimscaffold9200494290 Phenylpropanoid CAD medium pass
Csimscaffold9290495860 Phenylpropanoid CAD low borderline
Csimscaffold950500540 Phenylpropanoid CAD medium pass
Csimscaffold9730506140 Phenylpropanoid CAD low borderline
Csimscaffold9730506150 Phenylpropanoid CAD low borderline
Csimscaffold9730506160 Phenylpropanoid CAD medium pass
Csimscaffold9730506170 Phenylpropanoid CAD medium pass
Csimscaffold9730506180 Phenylpropanoid CAD low borderline
Csimscaffold9730506190 Phenylpropanoid CAD low borderline
Csimscaffold9730506200 Phenylpropanoid CAD low borderline
Csimscaffold9730506220 Phenylpropanoid CAD medium pass
Csimscaffold9800508340 Phenylpropanoid CAD low borderline
Csimscaffold9850509370 Phenylpropanoid CAD low borderline
Csimscaffold9860509480 Phenylpropanoid CAD medium pass
Csimscaffold9860509510 Phenylpropanoid CAD medium pass
Csimscaffold9860509540 Phenylpropanoid CAD medium pass
Csimscaffold9860509560 Phenylpropanoid CAD medium pass
Csimscaffold10430011630 Phenylpropanoid CCR medium pass
Csimscaffold10640015930 Phenylpropanoid CCR medium borderline
Csimscaffold110022860 Phenylpropanoid CCR medium borderline
Csimscaffold110022870 Phenylpropanoid CCR medium borderline
Csimscaffold110022880 Phenylpropanoid CCR low borderline
Csimscaffold110022890 Phenylpropanoid CCR medium borderline
Csimscaffold11970045400 Phenylpropanoid CCR low borderline