PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold1140031680 Flavonoid IFS low borderline
Csimscaffold11690038460 Flavonoid IFS medium borderline
Csimscaffold11690038470 Flavonoid IFS medium borderline
Csimscaffold11700039170 Flavonoid IFS medium borderline
Csimscaffold1180041250 Flavonoid IFS medium borderline
Csimscaffold11880043450 Flavonoid IFS low borderline
Csimscaffold12000046890 Flavonoid IFS medium borderline
Csimscaffold120046260 Flavonoid IFS medium borderline
Csimscaffold12240051390 Flavonoid IFS medium borderline
Csimscaffold1240054030 Flavonoid IFS medium borderline
Csimscaffold12590057330 Flavonoid IFS medium borderline
Csimscaffold12590057340 Flavonoid IFS medium borderline
Csimscaffold12700059540 Flavonoid IFS low borderline
Csimscaffold12800061330 Flavonoid IFS medium borderline
Csimscaffold12850062000 Flavonoid IFS low borderline
Csimscaffold13180069000 Flavonoid IFS medium borderline
Csimscaffold13180069010 Flavonoid IFS low borderline
Csimscaffold13450074270 Flavonoid IFS medium borderline
Csimscaffold13540076320 Flavonoid IFS low borderline
Csimscaffold13810083220 Flavonoid IFS low borderline
Csimscaffold13810083230 Flavonoid IFS low borderline
Csimscaffold13810083250 Flavonoid IFS low borderline
Csimscaffold13810083270 Flavonoid IFS low borderline
Csimscaffold13880084220 Flavonoid IFS low borderline
Csimscaffold14180090210 Flavonoid IFS low borderline
Csimscaffold14950103450 Flavonoid IFS low borderline
Csimscaffold15030105760 Flavonoid IFS medium borderline
Csimscaffold15030105790 Flavonoid IFS medium borderline
Csimscaffold15080106490 Flavonoid IFS low borderline
Csimscaffold15080106510 Flavonoid IFS low borderline
Csimscaffold15150107910 Flavonoid IFS low borderline
Csimscaffold15150107920 Flavonoid IFS low borderline
Csimscaffold15300110400 Flavonoid IFS low borderline
Csimscaffold15350111040 Flavonoid IFS low borderline
Csimscaffold15530113670 Flavonoid IFS medium borderline
Csimscaffold15860118580 Flavonoid IFS medium borderline
Csimscaffold16100122920 Flavonoid IFS low borderline
Csimscaffold1620124110 Flavonoid IFS medium borderline
Csimscaffold16340126250 Flavonoid IFS low borderline
Csimscaffold1650128290 Flavonoid IFS low borderline
Csimscaffold1660129890 Flavonoid IFS low borderline
Csimscaffold16710131660 Flavonoid IFS medium borderline
Csimscaffold1690134000 Flavonoid IFS low borderline
Csimscaffold17000136150 Flavonoid IFS low borderline
Csimscaffold1720138500 Flavonoid IFS low borderline
Csimscaffold1800149570 Flavonoid IFS medium borderline
Csimscaffold1820152320 Flavonoid IFS low borderline
Csimscaffold18230152840 Flavonoid IFS medium borderline
Csimscaffold18250153170 Flavonoid IFS medium borderline
Csimscaffold18610157670 Flavonoid IFS low borderline