PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold18780159370 Flavonoid IFS medium borderline
Csimscaffold1900163260 Flavonoid IFS low borderline
Csimscaffold19600170260 Flavonoid IFS medium borderline
Csimscaffold19830172930 Flavonoid IFS medium borderline
Csimscaffold20170178490 Flavonoid IFS low borderline
Csimscaffold2040181740 Flavonoid IFS medium borderline
Csimscaffold2040181750 Flavonoid IFS medium borderline
Csimscaffold2040181770 Flavonoid IFS medium borderline
Csimscaffold20480182940 Flavonoid IFS low borderline
Csimscaffold20770187440 Flavonoid IFS low borderline
Csimscaffold21130192860 Flavonoid IFS medium borderline
Csimscaffold21600197560 Flavonoid IFS low borderline
Csimscaffold21600197590 Flavonoid IFS low borderline
Csimscaffold21600197610 Flavonoid IFS low borderline
Csimscaffold21610197630 Flavonoid IFS medium borderline
Csimscaffold21760198930 Flavonoid IFS medium borderline
Csimscaffold21760198940 Flavonoid IFS medium borderline
Csimscaffold2200202010 Flavonoid IFS low borderline
Csimscaffold2200202020 Flavonoid IFS low borderline
Csimscaffold22030202370 Flavonoid IFS medium borderline
Csimscaffold22030202380 Flavonoid IFS medium borderline
Csimscaffold2240205950 Flavonoid IFS low borderline
Csimscaffold22530207470 Flavonoid IFS medium borderline
Csimscaffold22750209200 Flavonoid IFS low borderline
Csimscaffold2280209860 Flavonoid IFS medium borderline
Csimscaffold22870210390 Flavonoid IFS medium borderline
Csimscaffold22870210400 Flavonoid IFS medium borderline
Csimscaffold2340216710 Flavonoid IFS low borderline
Csimscaffold23700220060 Flavonoid IFS medium borderline
Csimscaffold2380221010 Flavonoid IFS medium borderline
Csimscaffold2400223800 Flavonoid IFS medium borderline
Csimscaffold24120225100 Flavonoid IFS low borderline
Csimscaffold24910232060 Flavonoid IFS low borderline
Csimscaffold2500233300 Flavonoid IFS medium borderline
Csimscaffold2500233310 Flavonoid IFS medium borderline
Csimscaffold2500233320 Flavonoid IFS medium borderline
Csimscaffold25110234400 Flavonoid IFS low borderline
Csimscaffold25230235320 Flavonoid IFS low borderline
Csimscaffold26670248400 Flavonoid IFS low borderline
Csimscaffold2750256690 Flavonoid IFS medium borderline
Csimscaffold2760257200 Flavonoid IFS medium borderline
Csimscaffold27940259690 Flavonoid IFS medium borderline
Csimscaffold280259940 Flavonoid IFS medium borderline
Csimscaffold28280263130 Flavonoid IFS medium borderline
Csimscaffold28560265050 Flavonoid IFS low borderline
Csimscaffold28930267520 Flavonoid IFS medium borderline
Csimscaffold28930267540 Flavonoid IFS medium borderline
Csimscaffold28990267690 Flavonoid IFS low borderline
Csimscaffold290267970 Flavonoid IFS medium borderline
Csimscaffold29450271940 Flavonoid IFS medium borderline