PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Csimscaffold3660317080 Phenylpropanoid 4CL low borderline
Csimscaffold3850325810 Phenylpropanoid 4CL medium pass
Csimscaffold4010335390 Phenylpropanoid 4CL medium pass
Csimscaffold40333650 Phenylpropanoid 4CL low borderline
Csimscaffold4500357480 Phenylpropanoid 4CL medium pass
Csimscaffold4500357500 Phenylpropanoid 4CL medium pass
Csimscaffold4500357510 Phenylpropanoid 4CL medium pass
Csimscaffold4610361590 Phenylpropanoid 4CL medium pass
Csimscaffold4780366760 Phenylpropanoid 4CL medium pass
Csimscaffold4900371400 Phenylpropanoid 4CL low borderline
Csimscaffold4950373020 Phenylpropanoid 4CL medium pass
Csimscaffold4950373030 Phenylpropanoid 4CL medium pass
Csimscaffold4950373040 Phenylpropanoid 4CL medium pass
Csimscaffold5850401200 Phenylpropanoid 4CL medium pass
Csimscaffold6110409560 Phenylpropanoid 4CL low borderline
Csimscaffold6660424430 Phenylpropanoid 4CL medium pass
Csimscaffold700436130 Phenylpropanoid 4CL medium pass
Csimscaffold700436150 Phenylpropanoid 4CL low borderline
Csimscaffold700436160 Phenylpropanoid 4CL medium pass
Csimscaffold7280443440 Phenylpropanoid 4CL low borderline
Csimscaffold7360445810 Phenylpropanoid 4CL low borderline
Csimscaffold7420447540 Phenylpropanoid 4CL medium pass
Csimscaffold7530450130 Phenylpropanoid 4CL low borderline
Csimscaffold760451870 Phenylpropanoid 4CL medium pass
Csimscaffold7620452420 Phenylpropanoid 4CL low borderline
Csimscaffold7950460890 Phenylpropanoid 4CL medium pass
Csimscaffold8090465180 Phenylpropanoid 4CL low borderline
Csimscaffold8460473640 Phenylpropanoid 4CL medium pass
Csimscaffold8560476530 Phenylpropanoid 4CL medium pass
Csimscaffold8560476540 Phenylpropanoid 4CL medium pass
Csimscaffold8970486270 Phenylpropanoid 4CL low borderline
Csimscaffold9100491230 Phenylpropanoid 4CL medium pass
Csimscaffold9600503090 Phenylpropanoid 4CL medium pass
Csimscaffold9600503100 Phenylpropanoid 4CL medium pass
Csimscaffold9600503120 Phenylpropanoid 4CL low borderline
Csimscaffold9600503130 Phenylpropanoid 4CL low borderline
Csimscaffold9600503140 Phenylpropanoid 4CL low borderline
Csimscaffold10110004430 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold10220006960 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold10220006970 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold10220007010 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold10220007080 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold10220007100 Phenylpropanoid C3'H/CYP98A medium pass
Csimscaffold10260007840 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold10410011320 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold10410011340 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold10410011350 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold10410011360 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold10550013880 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold10550013890 Phenylpropanoid C3'H/CYP98A medium borderline