PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Csimscaffold10590014590 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold10590014610 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold10700017470 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold10730017950 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold10870020280 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold1090021150 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold10960022200 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold110023240 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold11110026240 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold11150026560 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold11150026690 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold1140031680 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold1150034150 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold11540035150 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold11690038460 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold11690038470 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold11700039170 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold1180041250 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold11940044920 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold12000046890 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold12000046900 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold120046240 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold120046260 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold120046280 Phenylpropanoid C3'H/CYP98A high pass
Csimscaffold12240051390 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold12240051400 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold1240054030 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold12700059540 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold12760060510 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold12800061330 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold13180068960 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold13180068980 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold13180069000 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold13180069020 Phenylpropanoid C3'H/CYP98A medium pass
Csimscaffold13450074270 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold13540076330 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold13810083220 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold13810083230 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold13810083250 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold13810083270 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold1390084750 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold14180090210 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold14360093500 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold14770100380 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold14850101790 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold14850101800 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold14950103450 Phenylpropanoid C3'H/CYP98A low borderline
Csimscaffold150104560 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold15030105750 Phenylpropanoid C3'H/CYP98A medium borderline
Csimscaffold15030105760 Phenylpropanoid C3'H/CYP98A medium borderline