PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Csimscaffold16670130790 Flavonoid ANR medium pass
Csimscaffold1730140030 Flavonoid ANR low borderline
Csimscaffold19370167360 Flavonoid ANR medium borderline
Csimscaffold21800199450 Flavonoid ANR low borderline
Csimscaffold22090202770 Flavonoid ANR medium borderline
Csimscaffold26540247240 Flavonoid ANR low borderline
Csimscaffold28010261480 Flavonoid ANR medium borderline
Csimscaffold28010261490 Flavonoid ANR medium borderline
Csimscaffold310284070 Flavonoid ANR medium borderline
Csimscaffold3110284920 Flavonoid ANR low borderline
Csimscaffold37250320150 Flavonoid ANR medium borderline
Csimscaffold4020335590 Flavonoid ANR medium borderline
Csimscaffold420344320 Flavonoid ANR medium pass
Csimscaffold4430354840 Flavonoid ANR medium borderline
Csimscaffold46490362610 Flavonoid ANR medium borderline
Csimscaffold4970373820 Flavonoid ANR medium borderline
Csimscaffold50374470 Flavonoid ANR medium borderline
Csimscaffold5480390700 Flavonoid ANR medium borderline
Csimscaffold5480390710 Flavonoid ANR medium borderline
Csimscaffold5480390720 Flavonoid ANR medium borderline
Csimscaffold6470419060 Flavonoid ANR medium borderline
Csimscaffold6680424960 Flavonoid ANR medium borderline
Csimscaffold6680424970 Flavonoid ANR medium pass
Csimscaffold6680424980 Flavonoid ANR medium borderline
Csimscaffold6710426360 Flavonoid ANR medium borderline
Csimscaffold8620478260 Flavonoid ANR medium borderline
Csimscaffold9790507630 Flavonoid ANR medium borderline
Csimscaffold15280109820 Flavonoid ANS/LDOX medium borderline
Csimscaffold20440182360 Flavonoid ANS/LDOX medium borderline
Csimscaffold3480307110 Flavonoid ANS/LDOX low borderline
Csimscaffold37330320530 Flavonoid ANS/LDOX medium borderline
Csimscaffold460360870 Flavonoid ANS/LDOX low borderline
Csimscaffold470364340 Flavonoid ANS/LDOX low borderline
Csimscaffold5450389970 Flavonoid ANS/LDOX medium borderline
Csimscaffold6970434230 Flavonoid ANS/LDOX medium borderline
Csimscaffold6980434410 Flavonoid ANS/LDOX medium borderline
Csimscaffold1080019040 Flavonoid C4H medium borderline
Csimscaffold1150034150 Flavonoid C4H medium borderline
Csimscaffold14770100380 Flavonoid C4H medium borderline
Csimscaffold21130192870 Flavonoid C4H medium borderline
Csimscaffold22300205170 Flavonoid C4H low borderline
Csimscaffold22300205180 Flavonoid C4H medium pass
Csimscaffold35960313330 Flavonoid C4H medium borderline
Csimscaffold3910329290 Flavonoid C4H medium borderline
Csimscaffold39250329910 Flavonoid C4H medium borderline
Csimscaffold39250329930 Flavonoid C4H medium borderline
Csimscaffold410339390 Flavonoid C4H low borderline
Csimscaffold4420354400 Flavonoid C4H low borderline
Csimscaffold6280414040 Flavonoid C4H medium pass
Csimscaffold7840458250 Flavonoid C4H medium borderline