PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
Csimscaffold8060464650 Flavonoid C4H medium borderline
Csimscaffold8280469620 Flavonoid C4H medium borderline
Csimscaffold9040489540 Flavonoid C4H medium pass
Csimscaffold9040489550 Flavonoid C4H medium pass
Csimscaffold9040489560 Flavonoid C4H medium pass
Csimscaffold9040489570 Flavonoid C4H medium pass
Csimscaffold9810508380 Flavonoid C4H low borderline
Csimscaffold10120004820 Flavonoid CHI medium pass
Csimscaffold1660129910 Flavonoid CHI medium pass
Csimscaffold19850173140 Flavonoid CHI medium pass
Csimscaffold3070281560 Flavonoid CHI medium pass
Csimscaffold3550311480 Flavonoid CHI medium pass
Csimscaffold4210344830 Flavonoid CHI medium pass
Csimscaffold4210344840 Flavonoid CHI medium pass
Csimscaffold4260346520 Flavonoid CHI low borderline
Csimscaffold1020006200 Flavonoid CHS medium pass
Csimscaffold1020006240 Flavonoid CHS medium pass
Csimscaffold1020006250 Flavonoid CHS low borderline
Csimscaffold1020006260 Flavonoid CHS medium pass
Csimscaffold1060015020 Flavonoid CHS low borderline
Csimscaffold12340053000 Flavonoid CHS medium pass
Csimscaffold1370080080 Flavonoid CHS medium pass
Csimscaffold14730099960 Flavonoid CHS medium pass
Csimscaffold15050106080 Flavonoid CHS medium pass
Csimscaffold15050106090 Flavonoid CHS medium pass
Csimscaffold15050106120 Flavonoid CHS medium pass
Csimscaffold170135700 Flavonoid CHS medium pass
Csimscaffold18890160840 Flavonoid CHS medium pass
Csimscaffold190162960 Flavonoid CHS medium pass
Csimscaffold1940167700 Flavonoid CHS medium pass
Csimscaffold20950190120 Flavonoid CHS medium pass
Csimscaffold20950190150 Flavonoid CHS medium pass
Csimscaffold21350195080 Flavonoid CHS medium pass
Csimscaffold2290210690 Flavonoid CHS medium pass
Csimscaffold2290210700 Flavonoid CHS medium pass
Csimscaffold2290210720 Flavonoid CHS medium pass
Csimscaffold2290210760 Flavonoid CHS medium pass
Csimscaffold2290210780 Flavonoid CHS medium pass
Csimscaffold2290210810 Flavonoid CHS medium pass
Csimscaffold2290210820 Flavonoid CHS medium pass
Csimscaffold25090233920 Flavonoid CHS medium pass
Csimscaffold2650246890 Flavonoid CHS medium pass
Csimscaffold2730254730 Flavonoid CHS medium pass
Csimscaffold2870265800 Flavonoid CHS medium pass
Csimscaffold2870265820 Flavonoid CHS medium pass
Csimscaffold2870265840 Flavonoid CHS medium pass
Csimscaffold2870265890 Flavonoid CHS medium pass
Csimscaffold35080309150 Flavonoid CHS medium pass
Csimscaffold3860326520 Flavonoid CHS medium pass
Csimscaffold40360336510 Flavonoid CHS medium pass