PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2597
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Csimscaffold5900402980 Steroid CPD/CYP90A1 medium borderline
Csimscaffold6060408060 Steroid CPD/CYP90A1 low borderline
Csimscaffold6230412690 Steroid CPD/CYP90A1 low borderline
Csimscaffold6230412700 Steroid CPD/CYP90A1 low borderline
Csimscaffold6580422220 Steroid CPD/CYP90A1 low borderline
Csimscaffold7920460350 Steroid CPD/CYP90A1 low borderline
Csimscaffold9510501050 Steroid CPD/CYP90A1 medium borderline
Csimscaffold9810508380 Steroid CPD/CYP90A1 medium borderline
Csimscaffold11400032200 Steroid CPI1 high pass
Csimscaffold4320349690 Steroid CPI1 medium pass
Csimscaffold510378790 Steroid CPI1 high pass
Csimscaffold10220006960 Steroid CYP51G1 medium borderline
Csimscaffold10870020280 Steroid CYP51G1 medium borderline
Csimscaffold16320126140 Steroid CYP51G1 medium borderline
Csimscaffold16850133170 Steroid CYP51G1 medium borderline
Csimscaffold18230152840 Steroid CYP51G1 medium borderline
Csimscaffold19830172920 Steroid CYP51G1 medium borderline
Csimscaffold19830172930 Steroid CYP51G1 medium borderline
Csimscaffold21130192850 Steroid CYP51G1 medium borderline
Csimscaffold21130192890 Steroid CYP51G1 medium borderline
Csimscaffold3000277490 Steroid CYP51G1 medium borderline
Csimscaffold3180289020 Steroid CYP51G1 medium borderline
Csimscaffold3570312240 Steroid CYP51G1 medium borderline
Csimscaffold3910329270 Steroid CYP51G1 medium borderline
Csimscaffold4670363260 Steroid CYP51G1 medium borderline
Csimscaffold6440418550 Steroid CYP51G1 medium borderline
Csimscaffold7310444640 Steroid CYP51G1 medium borderline
Csimscaffold770454470 Steroid CYP51G1 medium borderline
Csimscaffold770454480 Steroid CYP51G1 medium borderline
Csimscaffold7940460680 Steroid CYP51G1 medium borderline
Csimscaffold7940460690 Steroid CYP51G1 medium borderline
Csimscaffold80462150 Steroid CYP51G1 medium borderline
Csimscaffold80462160 Steroid CYP51G1 medium borderline
Csimscaffold9700505750 Steroid CYP51G1 medium borderline
Csimscaffold10110004430 Steroid CYP90D1 low borderline
Csimscaffold10550013880 Steroid CYP90D1 low borderline
Csimscaffold10550013890 Steroid CYP90D1 low borderline
Csimscaffold10700017470 Steroid CYP90D1 medium borderline
Csimscaffold1090021150 Steroid CYP90D1 low borderline
Csimscaffold11110026240 Steroid CYP90D1 medium borderline
Csimscaffold13450074270 Steroid CYP90D1 low borderline
Csimscaffold14180090210 Steroid CYP90D1 medium borderline
Csimscaffold14360093500 Steroid CYP90D1 low borderline
Csimscaffold14850101790 Steroid CYP90D1 low borderline
Csimscaffold15150107900 Steroid CYP90D1 low borderline
Csimscaffold1690134000 Steroid CYP90D1 medium borderline
Csimscaffold17290139800 Steroid CYP90D1 medium borderline
Csimscaffold1830153920 Steroid CYP90D1 low borderline
Csimscaffold18780159380 Steroid CYP90D1 low borderline
Csimscaffold2200202020 Steroid CYP90D1 medium borderline