PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold22030202370 Steroid CYP90D1 low borderline
Csimscaffold22030202380 Steroid CYP90D1 low borderline
Csimscaffold22870210390 Steroid CYP90D1 low borderline
Csimscaffold22870210400 Steroid CYP90D1 low borderline
Csimscaffold2760257200 Steroid CYP90D1 low borderline
Csimscaffold290267970 Steroid CYP90D1 low borderline
Csimscaffold29450271940 Steroid CYP90D1 low borderline
Csimscaffold31040284680 Steroid CYP90D1 low borderline
Csimscaffold3850325870 Steroid CYP90D1 medium borderline
Csimscaffold3910329280 Steroid CYP90D1 low borderline
Csimscaffold4330350070 Steroid CYP90D1 medium borderline
Csimscaffold4480356510 Steroid CYP90D1 low borderline
Csimscaffold4770366540 Steroid CYP90D1 medium borderline
Csimscaffold4870370250 Steroid CYP90D1 medium borderline
Csimscaffold590402460 Steroid CYP90D1 low borderline
Csimscaffold6050407860 Steroid CYP90D1 low borderline
Csimscaffold6120409640 Steroid CYP90D1 low borderline
Csimscaffold700435960 Steroid CYP90D1 low borderline
Csimscaffold70435260 Steroid CYP90D1 low borderline
Csimscaffold8810482940 Steroid CYP90D1 medium borderline
Csimscaffold9300496360 Steroid CYP90D1 low borderline
Csimscaffold9330496850 Steroid CYP90D1 medium borderline
Csimscaffold12600057810 Steroid DET2 low borderline
Csimscaffold17390141050 Steroid DET2 medium pass
Csimscaffold1810150640 Steroid DET2 low borderline
Csimscaffold6950433690 Steroid DET2 low borderline
Csimscaffold1540111760 Steroid DWF1 medium pass
Csimscaffold19660170680 Steroid DWF1 medium pass
Csimscaffold19660170690 Steroid DWF1 medium pass
Csimscaffold20280179720 Steroid DWF1 medium pass
Csimscaffold20340180710 Steroid DWF1 medium pass
Csimscaffold24710230650 Steroid DWF1 medium pass
Csimscaffold33820301870 Steroid DWF1 medium pass
Csimscaffold490370930 Steroid DWF1 medium pass
Csimscaffold4910371620 Steroid DWF1 medium pass
Csimscaffold4910371660 Steroid DWF1 medium pass
Csimscaffold10410011350 Steroid DWF4/CYP90B1 low borderline
Csimscaffold10960022200 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold11150026560 Steroid DWF4/CYP90B1 low borderline
Csimscaffold11690038460 Steroid DWF4/CYP90B1 low borderline
Csimscaffold11690038470 Steroid DWF4/CYP90B1 low borderline
Csimscaffold11700039170 Steroid DWF4/CYP90B1 low borderline
Csimscaffold1180041250 Steroid DWF4/CYP90B1 low borderline
Csimscaffold11940044920 Steroid DWF4/CYP90B1 low borderline
Csimscaffold120046260 Steroid DWF4/CYP90B1 low borderline
Csimscaffold120046280 Steroid DWF4/CYP90B1 low borderline
Csimscaffold12240051400 Steroid DWF4/CYP90B1 low borderline
Csimscaffold12700059540 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold12850062000 Steroid DWF4/CYP90B1 medium borderline
Csimscaffold13810083220 Steroid DWF4/CYP90B1 low borderline