PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold31510287390 Rosmarinic Acid C4H low borderline
Csimscaffold31710288620 Rosmarinic Acid C4H medium pass
Csimscaffold31710288630 Rosmarinic Acid C4H low borderline
Csimscaffold3180289010 Rosmarinic Acid C4H low borderline
Csimscaffold3180289020 Rosmarinic Acid C4H medium pass
Csimscaffold3190289710 Rosmarinic Acid C4H low borderline
Csimscaffold3200290810 Rosmarinic Acid C4H low borderline
Csimscaffold3310297660 Rosmarinic Acid C4H low borderline
Csimscaffold3310297670 Rosmarinic Acid C4H low borderline
Csimscaffold33240298490 Rosmarinic Acid C4H low borderline
Csimscaffold34030303210 Rosmarinic Acid C4H medium pass
Csimscaffold34190303900 Rosmarinic Acid C4H low borderline
Csimscaffold3490307620 Rosmarinic Acid C4H medium pass
Csimscaffold3490307630 Rosmarinic Acid C4H medium pass
Csimscaffold3530310180 Rosmarinic Acid C4H low borderline
Csimscaffold35530311610 Rosmarinic Acid C4H low borderline
Csimscaffold3570312240 Rosmarinic Acid C4H medium pass
Csimscaffold35960313300 Rosmarinic Acid C4H low borderline
Csimscaffold35960313310 Rosmarinic Acid C4H low borderline
Csimscaffold35960313330 Rosmarinic Acid C4H medium pass
Csimscaffold36260315370 Rosmarinic Acid C4H low borderline
Csimscaffold3680317920 Rosmarinic Acid C4H low borderline
Csimscaffold3710319510 Rosmarinic Acid C4H low borderline
Csimscaffold3710319560 Rosmarinic Acid C4H low borderline
Csimscaffold3800323900 Rosmarinic Acid C4H medium pass
Csimscaffold390328400 Rosmarinic Acid C4H low borderline
Csimscaffold390328410 Rosmarinic Acid C4H low borderline
Csimscaffold3910329270 Rosmarinic Acid C4H low borderline
Csimscaffold3910329280 Rosmarinic Acid C4H low borderline
Csimscaffold3910329290 Rosmarinic Acid C4H medium pass
Csimscaffold39250329910 Rosmarinic Acid C4H medium pass
Csimscaffold39250329920 Rosmarinic Acid C4H low borderline
Csimscaffold39250329930 Rosmarinic Acid C4H medium pass
Csimscaffold400334590 Rosmarinic Acid C4H low borderline
Csimscaffold410339390 Rosmarinic Acid C4H low borderline
Csimscaffold4130341080 Rosmarinic Acid C4H low borderline
Csimscaffold4130341300 Rosmarinic Acid C4H medium pass
Csimscaffold4220345120 Rosmarinic Acid C4H medium pass
Csimscaffold43240349790 Rosmarinic Acid C4H low borderline
Csimscaffold4330350070 Rosmarinic Acid C4H low borderline
Csimscaffold4410354050 Rosmarinic Acid C4H low borderline
Csimscaffold4420354370 Rosmarinic Acid C4H low borderline
Csimscaffold4420354400 Rosmarinic Acid C4H low borderline
Csimscaffold4430354570 Rosmarinic Acid C4H low borderline
Csimscaffold4430354590 Rosmarinic Acid C4H low borderline
Csimscaffold4430354610 Rosmarinic Acid C4H low borderline
Csimscaffold4430354620 Rosmarinic Acid C4H medium pass
Csimscaffold4430354630 Rosmarinic Acid C4H low borderline
Csimscaffold4480356510 Rosmarinic Acid C4H low borderline
Csimscaffold460361020 Rosmarinic Acid C4H low borderline