PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold4430354590 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold4430354610 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold4860369890 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold5000375530 Flavonoid F3'H/CYP75B low borderline
Csimscaffold5550392620 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold590402450 Flavonoid F3'H/CYP75B low borderline
Csimscaffold590402460 Flavonoid F3'H/CYP75B low borderline
Csimscaffold5930404060 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold610409190 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold6120409620 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold6540421280 Flavonoid F3'H/CYP75B low borderline
Csimscaffold6570422020 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold6570422030 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold6570422040 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold6570422100 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold6570422120 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold6570422150 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold7020436990 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold740446850 Flavonoid F3'H/CYP75B low borderline
Csimscaffold770454430 Flavonoid F3'H/CYP75B low borderline
Csimscaffold770454450 Flavonoid F3'H/CYP75B low borderline
Csimscaffold7940460680 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold7980461380 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold8100465710 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold8910485050 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold8910485150 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold9280495700 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold9510501050 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold9830508760 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold10190005880 Flavonoid F3H low borderline
Csimscaffold1040011140 Flavonoid F3H low borderline
Csimscaffold1070017020 Flavonoid F3H medium borderline
Csimscaffold1120027700 Flavonoid F3H low borderline
Csimscaffold11560035470 Flavonoid F3H medium borderline
Csimscaffold11660037800 Flavonoid F3H medium borderline
Csimscaffold11750040490 Flavonoid F3H low borderline
Csimscaffold1180041460 Flavonoid F3H low borderline
Csimscaffold13980085800 Flavonoid F3H medium borderline
Csimscaffold1430092570 Flavonoid F3H medium borderline
Csimscaffold14320092920 Flavonoid F3H medium borderline
Csimscaffold14430094680 Flavonoid F3H medium borderline
Csimscaffold14430094690 Flavonoid F3H medium borderline
Csimscaffold14500096210 Flavonoid F3H medium borderline
Csimscaffold14560097000 Flavonoid F3H low borderline
Csimscaffold14720099910 Flavonoid F3H low borderline
Csimscaffold14990103800 Flavonoid F3H medium borderline
Csimscaffold14990103810 Flavonoid F3H medium borderline
Csimscaffold15240109460 Flavonoid F3H low borderline
Csimscaffold15240109470 Flavonoid F3H low borderline
Csimscaffold160120840 Flavonoid F3H low borderline