PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold12760060510 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold13180068960 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold13180068980 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold13180069020 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold13550076660 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold1390084750 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold14360093500 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold14850101790 Flavonoid F3'H/CYP75B low borderline
Csimscaffold14850101800 Flavonoid F3'H/CYP75B low borderline
Csimscaffold15150107940 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold15300110390 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold16710131680 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold1680132810 Flavonoid F3'H/CYP75B low borderline
Csimscaffold1680132820 Flavonoid F3'H/CYP75B low borderline
Csimscaffold16850133170 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold16920134390 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold17750145330 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold17750145360 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold17970148250 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold1830153920 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold18610157680 Flavonoid F3'H/CYP75B low borderline
Csimscaffold19130164790 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold19830172920 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold20890189050 Flavonoid F3'H/CYP75B low borderline
Csimscaffold21130192850 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold21130192890 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold21320194860 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold21600197580 Flavonoid F3'H/CYP75B low borderline
Csimscaffold21760198910 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold22250204530 Flavonoid F3'H/CYP75B low borderline
Csimscaffold22300205190 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold2330216030 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold23330216350 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold28280263120 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold29610273130 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold29810274670 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold31710288620 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold3180289020 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold3200290810 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold33240298490 Flavonoid F3'H/CYP75B low borderline
Csimscaffold3570312240 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold35960313300 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold3680317920 Flavonoid F3'H/CYP75B high pass
Csimscaffold3800323900 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold390328400 Flavonoid F3'H/CYP75B low borderline
Csimscaffold3910329270 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold39250329920 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold4130341300 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold43240349790 Flavonoid F3'H/CYP75B medium borderline
Csimscaffold4430354570 Flavonoid F3'H/CYP75B medium borderline