PlantSME Plant secondary metabolism enzyme database

Calamus simplicifolius (calamus_simplicifolius)

Imported from atlas release summary for Calamus simplicifolius.

2844
Candidate Protein Records
2597
Pathway-Level Records
5967
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 701 20 UGT (261) View species results
Alkaloid pathway 581 23 7DLGT (118) View species results
Phenylpropanoid pathway 578 13 POD (193) View species results
Flavonoid pathway 355 12 UFGT (195) View species results
Rosmarinic acid pathway 220 7 C4H (97) View species results
Steroid pathway 162 12 CAS (69) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2163 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 483 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Csimscaffold3180289010 Phenylpropanoid C4H/CYP73A low borderline
Csimscaffold34190303900 Phenylpropanoid C4H/CYP73A low borderline
Csimscaffold35960313330 Phenylpropanoid C4H/CYP73A medium borderline
Csimscaffold3910329290 Phenylpropanoid C4H/CYP73A medium borderline
Csimscaffold39250329910 Phenylpropanoid C4H/CYP73A medium borderline
Csimscaffold39250329930 Phenylpropanoid C4H/CYP73A medium borderline
Csimscaffold400334590 Phenylpropanoid C4H/CYP73A low borderline
Csimscaffold410339390 Phenylpropanoid C4H/CYP73A low borderline
Csimscaffold4430354630 Phenylpropanoid C4H/CYP73A medium borderline
Csimscaffold5290384260 Phenylpropanoid C4H/CYP73A low borderline
Csimscaffold6120409600 Phenylpropanoid C4H/CYP73A medium borderline
Csimscaffold6120409650 Phenylpropanoid C4H/CYP73A low borderline
Csimscaffold6280414040 Phenylpropanoid C4H/CYP73A medium borderline
Csimscaffold770454430 Phenylpropanoid C4H/CYP73A low borderline
Csimscaffold8060464650 Phenylpropanoid C4H/CYP73A medium borderline
Csimscaffold8280469620 Phenylpropanoid C4H/CYP73A medium borderline
Csimscaffold830470550 Phenylpropanoid C4H/CYP73A medium borderline
Csimscaffold830470600 Phenylpropanoid C4H/CYP73A low borderline
Csimscaffold9040489540 Phenylpropanoid C4H/CYP73A medium borderline
Csimscaffold9040489550 Phenylpropanoid C4H/CYP73A medium pass
Csimscaffold9040489560 Phenylpropanoid C4H/CYP73A medium borderline
Csimscaffold9040489570 Phenylpropanoid C4H/CYP73A medium pass
Csimscaffold9140492160 Phenylpropanoid C4H/CYP73A low borderline
Csimscaffold9570502350 Phenylpropanoid C4H/CYP73A low borderline
Csimscaffold9810508380 Phenylpropanoid C4H/CYP73A low borderline
Csimscaffold100001440 Phenylpropanoid CAD low borderline
Csimscaffold1030008440 Phenylpropanoid CAD low borderline
Csimscaffold1030008480 Phenylpropanoid CAD low borderline
Csimscaffold1030008490 Phenylpropanoid CAD low borderline
Csimscaffold1030008500 Phenylpropanoid CAD medium pass
Csimscaffold10570014260 Phenylpropanoid CAD medium pass
Csimscaffold1080019180 Phenylpropanoid CAD low borderline
Csimscaffold11060024870 Phenylpropanoid CAD medium pass
Csimscaffold11870043310 Phenylpropanoid CAD medium pass
Csimscaffold12110049180 Phenylpropanoid CAD medium pass
Csimscaffold13220069870 Phenylpropanoid CAD medium pass
Csimscaffold13380072360 Phenylpropanoid CAD medium borderline
Csimscaffold13380072380 Phenylpropanoid CAD low borderline
Csimscaffold13380072390 Phenylpropanoid CAD medium borderline
Csimscaffold13380072400 Phenylpropanoid CAD medium borderline
Csimscaffold13380072410 Phenylpropanoid CAD low borderline
Csimscaffold13400073270 Phenylpropanoid CAD medium pass
Csimscaffold1380082680 Phenylpropanoid CAD medium pass
Csimscaffold1380082960 Phenylpropanoid CAD medium borderline
Csimscaffold1380082970 Phenylpropanoid CAD medium borderline
Csimscaffold14210090880 Phenylpropanoid CAD medium pass
Csimscaffold15580114300 Phenylpropanoid CAD low borderline
Csimscaffold15660115630 Phenylpropanoid CAD low borderline
Csimscaffold15860118630 Phenylpropanoid CAD low borderline
Csimscaffold16150123570 Phenylpropanoid CAD low borderline