PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Gene Pathway Family Confidence Status
Lsic00G0000790.1 Rosmarinic Acid 4CL medium pass
Lsic01G0000800.1 Rosmarinic Acid 4CL low borderline
Lsic01G0005400.1 Rosmarinic Acid 4CL medium pass
Lsic02G0004840.1 Rosmarinic Acid 4CL low borderline
Lsic02G0026350.1 Rosmarinic Acid 4CL medium pass
Lsic02G0026360.1 Rosmarinic Acid 4CL medium pass
Lsic02G0026370.1 Rosmarinic Acid 4CL medium pass
Lsic03G0000100.1 Rosmarinic Acid 4CL medium pass
Lsic03G0011290.1 Rosmarinic Acid 4CL low borderline
Lsic03G0012450.1 Rosmarinic Acid 4CL medium pass
Lsic03G0020060.1 Rosmarinic Acid 4CL medium pass
Lsic04G0001120.1 Rosmarinic Acid 4CL medium pass
Lsic04G0006900.1 Rosmarinic Acid 4CL medium pass
Lsic04G0017920.1 Rosmarinic Acid 4CL low borderline
Lsic04G0017990.1 Rosmarinic Acid 4CL medium pass
Lsic04G0018000.1 Rosmarinic Acid 4CL medium pass
Lsic05G0004210.1 Rosmarinic Acid 4CL low borderline
Lsic05G0006780.1 Rosmarinic Acid 4CL low borderline
Lsic05G0014350.1 Rosmarinic Acid 4CL low borderline
Lsic05G0015810.1 Rosmarinic Acid 4CL medium pass
Lsic06G0011330.1 Rosmarinic Acid 4CL medium pass
Lsic07G0007170.1 Rosmarinic Acid 4CL low borderline
Lsic07G0010690.1 Rosmarinic Acid 4CL medium pass
Lsic09G0001760.1 Rosmarinic Acid 4CL low borderline
Lsic09G0002720.1 Rosmarinic Acid 4CL medium pass
Lsic09G0004650.1 Rosmarinic Acid 4CL medium pass
Lsic09G0008420.1 Rosmarinic Acid 4CL medium pass
Lsic09G0008810.1 Rosmarinic Acid 4CL medium pass
Lsic09G0008820.1 Rosmarinic Acid 4CL medium pass
Lsic09G0008870.1 Rosmarinic Acid 4CL medium pass
Lsic09G0008880.1 Rosmarinic Acid 4CL medium pass
Lsic09G0008890.1 Rosmarinic Acid 4CL medium pass
Lsic09G0016140.1 Rosmarinic Acid 4CL low borderline
Lsic10G0002320.1 Rosmarinic Acid 4CL medium pass
Lsic10G0003310.1 Rosmarinic Acid 4CL low borderline
Lsic11G0007230.1 Rosmarinic Acid 4CL medium pass
Lsic11G0013370.1 Rosmarinic Acid 4CL low borderline
Lsic00G0001970.1 Rosmarinic Acid C4H low borderline
Lsic00G0002110.1 Rosmarinic Acid C4H low borderline
Lsic01G0001570.1 Rosmarinic Acid C4H low borderline
Lsic01G0004140.1 Rosmarinic Acid C4H low borderline
Lsic01G0005000.1 Rosmarinic Acid C4H low borderline
Lsic01G0005010.1 Rosmarinic Acid C4H low borderline
Lsic01G0006220.1 Rosmarinic Acid C4H low borderline
Lsic01G0006380.1 Rosmarinic Acid C4H low borderline
Lsic01G0007120.1 Rosmarinic Acid C4H low borderline
Lsic01G0007130.1 Rosmarinic Acid C4H low borderline
Lsic01G0007140.1 Rosmarinic Acid C4H low borderline
Lsic01G0007160.1 Rosmarinic Acid C4H low borderline
Lsic01G0007170.1 Rosmarinic Acid C4H low borderline