PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic01G0009430.1 Alkaloid IO medium borderline
Lsic01G0009440.1 Alkaloid IO medium borderline
Lsic01G0010640.1 Alkaloid IO low borderline
Lsic01G0010720.1 Alkaloid IO low borderline
Lsic02G0025950.1 Alkaloid IO medium borderline
Lsic03G0012770.1 Alkaloid IO low borderline
Lsic03G0019480.1 Alkaloid IO medium borderline
Lsic04G0001330.1 Alkaloid IO medium borderline
Lsic04G0006790.1 Alkaloid IO medium borderline
Lsic04G0009720.1 Alkaloid IO low borderline
Lsic04G0014190.1 Alkaloid IO medium borderline
Lsic04G0016090.1 Alkaloid IO medium borderline
Lsic04G0016120.1 Alkaloid IO medium borderline
Lsic04G0016150.1 Alkaloid IO medium borderline
Lsic04G0016160.1 Alkaloid IO medium borderline
Lsic04G0016180.1 Alkaloid IO medium borderline
Lsic04G0016240.1 Alkaloid IO medium borderline
Lsic04G0016300.1 Alkaloid IO medium borderline
Lsic07G0003900.1 Alkaloid IO medium borderline
Lsic07G0005640.1 Alkaloid IO low borderline
Lsic08G0006590.1 Alkaloid IO medium borderline
Lsic08G0014260.1 Alkaloid IO low borderline
Lsic09G0000550.1 Alkaloid IO medium borderline
Lsic09G0003480.1 Alkaloid IO medium borderline
Lsic09G0003490.1 Alkaloid IO medium borderline
Lsic09G0003810.1 Alkaloid IO medium borderline
Lsic09G0016570.1 Alkaloid IO medium pass
Lsic09G0017850.1 Alkaloid IO medium borderline
Lsic09G0017880.1 Alkaloid IO medium borderline
Lsic10G0001650.1 Alkaloid IO medium borderline
Lsic10G0001690.1 Alkaloid IO medium pass
Lsic10G0001700.1 Alkaloid IO medium borderline
Lsic10G0001770.1 Alkaloid IO medium borderline
Lsic11G0010510.1 Alkaloid IO low borderline
Lsic11G0010520.1 Alkaloid IO low borderline
Lsic02G0012870.1 Alkaloid ISY medium pass
Lsic04G0015010.1 Alkaloid ISY medium pass
Lsic01G0006580.1 Alkaloid LAMT low borderline
Lsic01G0006590.1 Alkaloid LAMT medium borderline
Lsic04G0009970.1 Alkaloid LAMT medium borderline
Lsic04G0009980.1 Alkaloid LAMT medium borderline
Lsic04G0016930.1 Alkaloid LAMT medium borderline
Lsic07G0002480.1 Alkaloid LAMT medium borderline
Lsic07G0010920.1 Alkaloid LAMT medium borderline
Lsic06G0015860.1 Alkaloid MPO medium pass
Lsic09G0003790.1 Alkaloid MPO medium pass
Lsic09G0003800.1 Alkaloid MPO medium pass
Lsic09G0013230.1 Alkaloid MPO medium pass
Lsic09G0013240.1 Alkaloid MPO medium pass
Lsic09G0013250.1 Alkaloid MPO medium pass