PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic09G0013260.1 Alkaloid MPO medium pass
Lsic02G0000620.1 Alkaloid NCS medium borderline
Lsic04G0024150.1 Alkaloid NCS medium borderline
Lsic05G0006390.1 Alkaloid NCS medium borderline
Lsic05G0006940.1 Alkaloid NCS low borderline
Lsic05G0006950.1 Alkaloid NCS low borderline
Lsic06G0010220.1 Alkaloid NCS medium borderline
Lsic07G0001310.1 Alkaloid NCS medium borderline
Lsic08G0004100.1 Alkaloid NCS medium borderline
Lsic08G0011550.1 Alkaloid NCS medium borderline
Lsic09G0005620.1 Alkaloid NCS medium borderline
Lsic10G0002660.1 Alkaloid NCS medium pass
Lsic10G0002670.1 Alkaloid NCS medium pass
Lsic01G0000520.1 Alkaloid NMT low borderline
Lsic01G0003430.1 Alkaloid NMT low borderline
Lsic01G0005930.1 Alkaloid NMT medium pass
Lsic01G0006570.1 Alkaloid NMT medium borderline
Lsic01G0010410.1 Alkaloid NMT medium pass
Lsic01G0011710.1 Alkaloid NMT low borderline
Lsic01G0017220.1 Alkaloid NMT medium pass
Lsic01G0020670.1 Alkaloid NMT low borderline
Lsic02G0002320.1 Alkaloid NMT medium borderline
Lsic02G0017710.1 Alkaloid NMT low borderline
Lsic02G0018830.1 Alkaloid NMT medium borderline
Lsic03G0011140.1 Alkaloid NMT medium pass
Lsic03G0011980.1 Alkaloid NMT low borderline
Lsic03G0011990.1 Alkaloid NMT low borderline
Lsic03G0012620.1 Alkaloid NMT medium pass
Lsic03G0015630.1 Alkaloid NMT low borderline
Lsic03G0019670.1 Alkaloid NMT medium borderline
Lsic04G0000110.1 Alkaloid NMT low borderline
Lsic04G0017800.1 Alkaloid NMT medium borderline
Lsic04G0019720.1 Alkaloid NMT low borderline
Lsic04G0021760.1 Alkaloid NMT medium pass
Lsic05G0000950.1 Alkaloid NMT low borderline
Lsic05G0004420.1 Alkaloid NMT medium pass
Lsic05G0004430.1 Alkaloid NMT medium pass
Lsic05G0017790.1 Alkaloid NMT medium pass
Lsic06G0002580.1 Alkaloid NMT medium pass
Lsic06G0009400.1 Alkaloid NMT medium pass
Lsic06G0012860.1 Alkaloid NMT medium borderline
Lsic07G0012560.1 Alkaloid NMT medium pass
Lsic08G0003210.1 Alkaloid NMT medium pass
Lsic08G0004650.1 Alkaloid NMT low borderline
Lsic08G0004660.1 Alkaloid NMT medium pass
Lsic08G0005670.1 Alkaloid NMT medium pass
Lsic08G0007620.1 Alkaloid NMT medium pass
Lsic08G0016600.1 Alkaloid NMT medium borderline
Lsic09G0000100.1 Alkaloid NMT medium pass
Lsic09G0002640.1 Alkaloid NMT low borderline