PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Lsic04G0015760.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic04G0016230.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic04G0016260.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic04G0016270.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic04G0016470.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic04G0019580.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic04G0019600.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic04G0019610.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic05G0012180.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic05G0021280.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic07G0006240.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic08G0009030.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic09G0000550.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic09G0002450.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic09G0015720.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic09G0016570.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic09G0017870.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic10G0001640.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic10G0001660.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic10G0002200.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic10G0002510.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic10G0006810.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic10G0014870.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic11G0016440.1 Steroid BR6OX2/CYP85A2 medium borderline
Lsic00G0001880.1 Steroid CAS medium pass
Lsic01G0020690.1 Steroid CAS medium pass
Lsic02G0001530.1 Steroid CAS medium pass
Lsic02G0006650.1 Steroid CAS medium pass
Lsic02G0006660.1 Steroid CAS low borderline
Lsic02G0006670.1 Steroid CAS low borderline
Lsic02G0017250.1 Steroid CAS medium pass
Lsic02G0017260.1 Steroid CAS medium pass
Lsic02G0017280.1 Steroid CAS medium pass
Lsic02G0017490.1 Steroid CAS medium pass
Lsic02G0017500.1 Steroid CAS medium pass
Lsic02G0017520.1 Steroid CAS medium pass
Lsic02G0018390.1 Steroid CAS medium pass
Lsic02G0028220.1 Steroid CAS medium pass
Lsic02G0028230.1 Steroid CAS low borderline
Lsic03G0016570.1 Steroid CAS medium pass
Lsic04G0006980.1 Steroid CAS medium pass
Lsic04G0006990.1 Steroid CAS medium pass
Lsic04G0007000.1 Steroid CAS medium pass
Lsic04G0011470.1 Steroid CAS low borderline
Lsic05G0006530.1 Steroid CAS low borderline
Lsic05G0006560.1 Steroid CAS low borderline
Lsic05G0006570.1 Steroid CAS low borderline
Lsic05G0006580.1 Steroid CAS low borderline
Lsic05G0006590.1 Steroid CAS medium pass
Lsic05G0006610.1 Steroid CAS low borderline