PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Lsic05G0006620.1 Steroid CAS low borderline
Lsic05G0009380.1 Steroid CAS medium pass
Lsic06G0002040.1 Steroid CAS medium pass
Lsic06G0002050.1 Steroid CAS medium pass
Lsic06G0002060.1 Steroid CAS medium pass
Lsic06G0002070.1 Steroid CAS medium pass
Lsic06G0012580.1 Steroid CAS medium pass
Lsic06G0016920.1 Steroid CAS medium pass
Lsic07G0014090.1 Steroid CAS medium pass
Lsic08G0016870.1 Steroid CAS medium pass
Lsic09G0015770.1 Steroid CAS medium pass
Lsic09G0017820.1 Steroid CAS medium pass
Lsic09G0017830.1 Steroid CAS medium pass
Lsic09G0017840.1 Steroid CAS medium pass
Lsic10G0001840.1 Steroid CAS medium pass
Lsic10G0006830.1 Steroid CAS low borderline
Lsic10G0006840.1 Steroid CAS medium pass
Lsic10G0006910.1 Steroid CAS medium pass
Lsic10G0006920.1 Steroid CAS medium pass
Lsic11G0004720.1 Steroid CAS medium pass
Lsic11G0004930.1 Steroid CAS medium pass
Lsic11G0004940.1 Steroid CAS medium pass
Lsic11G0015870.1 Steroid CAS low borderline
Lsic01G0009420.1 Steroid CPD/CYP90A1 low borderline
Lsic01G0010720.1 Steroid CPD/CYP90A1 low borderline
Lsic01G0012770.1 Steroid CPD/CYP90A1 low borderline
Lsic03G0004920.1 Steroid CPD/CYP90A1 medium borderline
Lsic03G0016320.1 Steroid CPD/CYP90A1 low borderline
Lsic04G0001330.1 Steroid CPD/CYP90A1 medium borderline
Lsic04G0006180.1 Steroid CPD/CYP90A1 medium borderline
Lsic04G0006200.1 Steroid CPD/CYP90A1 medium borderline
Lsic04G0016220.1 Steroid CPD/CYP90A1 medium borderline
Lsic05G0008060.1 Steroid CPD/CYP90A1 low borderline
Lsic05G0009820.1 Steroid CPD/CYP90A1 low borderline
Lsic09G0003730.1 Steroid CPD/CYP90A1 low borderline
Lsic09G0003840.1 Steroid CPD/CYP90A1 medium borderline
Lsic02G0004970.1 Steroid CPI1 medium pass
Lsic02G0004980.1 Steroid CPI1 low borderline
Lsic04G0008030.1 Steroid CPI1 low borderline
Lsic00G0001970.1 Steroid CYP51G1 medium borderline
Lsic02G0004280.1 Steroid CYP51G1 medium borderline
Lsic02G0004300.1 Steroid CYP51G1 medium borderline
Lsic02G0004330.1 Steroid CYP51G1 medium borderline
Lsic02G0004370.1 Steroid CYP51G1 medium borderline
Lsic02G0004390.1 Steroid CYP51G1 medium borderline
Lsic02G0004420.1 Steroid CYP51G1 medium borderline
Lsic04G0006160.1 Steroid CYP51G1 medium borderline
Lsic04G0006170.1 Steroid CYP51G1 medium borderline
Lsic06G0015910.1 Steroid CYP51G1 medium borderline
Lsic07G0002250.1 Steroid CYP51G1 medium borderline