PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic03G0010750.1 Flavonoid IFR low borderline
Lsic03G0015210.1 Flavonoid IFR low borderline
Lsic05G0002580.1 Flavonoid IFR low borderline
Lsic05G0006250.1 Flavonoid IFR medium pass
Lsic05G0008760.1 Flavonoid IFR high pass
Lsic05G0013430.1 Flavonoid IFR low borderline
Lsic05G0015020.1 Flavonoid IFR medium pass
Lsic06G0005520.1 Flavonoid IFR low borderline
Lsic07G0007240.1 Flavonoid IFR low borderline
Lsic08G0012680.1 Flavonoid IFR low borderline
Lsic08G0013870.1 Flavonoid IFR high pass
Lsic09G0014380.1 Flavonoid IFR low borderline
Lsic09G0018020.1 Flavonoid IFR low borderline
Lsic10G0003760.1 Flavonoid IFR high pass
Lsic10G0003770.1 Flavonoid IFR high pass
Lsic10G0003780.1 Flavonoid IFR high pass
Lsic10G0008210.1 Flavonoid IFR low borderline
Lsic10G0008220.1 Flavonoid IFR medium pass
Lsic10G0011720.1 Flavonoid IFR low borderline
Lsic11G0011130.1 Flavonoid IFR high pass
Lsic11G0011160.1 Flavonoid IFR high pass
Lsic11G0011170.1 Flavonoid IFR medium pass
Lsic11G0011180.1 Flavonoid IFR medium pass
Lsic11G0011190.1 Flavonoid IFR medium pass
Lsic11G0011200.1 Flavonoid IFR medium pass
Lsic11G0011410.1 Flavonoid IFR low borderline
Lsic00G0002110.1 Flavonoid IFS low borderline
Lsic01G0001570.1 Flavonoid IFS low borderline
Lsic01G0006380.1 Flavonoid IFS low borderline
Lsic01G0006540.1 Flavonoid IFS low borderline
Lsic01G0007160.1 Flavonoid IFS medium borderline
Lsic01G0007170.1 Flavonoid IFS medium pass
Lsic01G0007190.1 Flavonoid IFS medium borderline
Lsic01G0007200.1 Flavonoid IFS medium borderline
Lsic01G0007210.1 Flavonoid IFS medium borderline
Lsic01G0007220.1 Flavonoid IFS medium borderline
Lsic01G0009420.1 Flavonoid IFS medium borderline
Lsic01G0009440.1 Flavonoid IFS medium borderline
Lsic01G0010620.1 Flavonoid IFS low borderline
Lsic01G0010630.1 Flavonoid IFS low borderline
Lsic01G0010650.1 Flavonoid IFS low borderline
Lsic01G0010680.1 Flavonoid IFS low borderline
Lsic01G0010700.1 Flavonoid IFS low borderline
Lsic01G0010710.1 Flavonoid IFS low borderline
Lsic01G0010720.1 Flavonoid IFS low borderline
Lsic01G0010730.1 Flavonoid IFS low borderline
Lsic01G0010740.1 Flavonoid IFS low borderline
Lsic01G0018910.1 Flavonoid IFS medium borderline
Lsic02G0002970.1 Flavonoid IFS low borderline
Lsic02G0004300.1 Flavonoid IFS medium borderline