PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic02G0004310.1 Flavonoid IFS medium borderline
Lsic02G0004370.1 Flavonoid IFS medium borderline
Lsic02G0004390.1 Flavonoid IFS medium borderline
Lsic02G0004400.1 Flavonoid IFS medium borderline
Lsic02G0012980.1 Flavonoid IFS low borderline
Lsic02G0013430.1 Flavonoid IFS low borderline
Lsic02G0016080.1 Flavonoid IFS low borderline
Lsic02G0020170.1 Flavonoid IFS low borderline
Lsic02G0020570.1 Flavonoid IFS low borderline
Lsic02G0025340.1 Flavonoid IFS low borderline
Lsic02G0025950.1 Flavonoid IFS medium borderline
Lsic02G0029440.1 Flavonoid IFS low borderline
Lsic03G0001090.1 Flavonoid IFS low borderline
Lsic03G0001830.1 Flavonoid IFS low borderline
Lsic03G0004920.1 Flavonoid IFS low borderline
Lsic03G0011760.1 Flavonoid IFS low borderline
Lsic03G0012190.1 Flavonoid IFS medium borderline
Lsic03G0012760.1 Flavonoid IFS low borderline
Lsic03G0012770.1 Flavonoid IFS low borderline
Lsic03G0014890.1 Flavonoid IFS low borderline
Lsic03G0014910.1 Flavonoid IFS low borderline
Lsic03G0016280.1 Flavonoid IFS medium borderline
Lsic03G0017130.1 Flavonoid IFS medium borderline
Lsic03G0019090.1 Flavonoid IFS low borderline
Lsic04G0003500.1 Flavonoid IFS low borderline
Lsic04G0006190.1 Flavonoid IFS medium borderline
Lsic04G0006210.1 Flavonoid IFS medium borderline
Lsic04G0006220.1 Flavonoid IFS medium borderline
Lsic04G0006240.1 Flavonoid IFS medium borderline
Lsic04G0006250.1 Flavonoid IFS medium borderline
Lsic04G0009720.1 Flavonoid IFS low borderline
Lsic04G0012090.1 Flavonoid IFS low borderline
Lsic04G0012100.1 Flavonoid IFS low borderline
Lsic04G0015060.1 Flavonoid IFS medium pass
Lsic04G0015100.1 Flavonoid IFS medium borderline
Lsic04G0015110.1 Flavonoid IFS medium borderline
Lsic04G0016090.1 Flavonoid IFS medium borderline
Lsic04G0016150.1 Flavonoid IFS medium borderline
Lsic04G0016200.1 Flavonoid IFS medium borderline
Lsic04G0016270.1 Flavonoid IFS medium borderline
Lsic04G0016290.1 Flavonoid IFS low borderline
Lsic04G0016300.1 Flavonoid IFS medium borderline
Lsic04G0019580.1 Flavonoid IFS low borderline
Lsic04G0023680.1 Flavonoid IFS medium borderline
Lsic05G0000630.1 Flavonoid IFS low borderline
Lsic05G0000640.1 Flavonoid IFS low borderline
Lsic05G0000650.1 Flavonoid IFS low borderline
Lsic05G0000660.1 Flavonoid IFS low borderline
Lsic05G0007430.1 Flavonoid IFS low borderline
Lsic05G0010630.1 Flavonoid IFS medium borderline