PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic10G0002480.1 Rosmarinic Acid C4H low borderline
Lsic10G0002500.1 Rosmarinic Acid C4H low borderline
Lsic10G0002510.1 Rosmarinic Acid C4H medium pass
Lsic10G0002520.1 Rosmarinic Acid C4H low borderline
Lsic10G0006810.1 Rosmarinic Acid C4H medium pass
Lsic10G0014870.1 Rosmarinic Acid C4H medium pass
Lsic11G0000820.1 Rosmarinic Acid C4H medium pass
Lsic11G0000900.1 Rosmarinic Acid C4H medium pass
Lsic11G0002960.1 Rosmarinic Acid C4H low borderline
Lsic11G0008150.1 Rosmarinic Acid C4H medium pass
Lsic11G0008160.1 Rosmarinic Acid C4H medium pass
Lsic11G0008170.1 Rosmarinic Acid C4H medium pass
Lsic11G0011330.1 Rosmarinic Acid C4H medium pass
Lsic01G0015570.1 Rosmarinic Acid CPR medium pass
Lsic03G0022310.1 Rosmarinic Acid CPR low borderline
Lsic06G0011760.1 Rosmarinic Acid CPR medium pass
Lsic07G0001270.1 Rosmarinic Acid CPR medium pass
Lsic11G0007580.1 Rosmarinic Acid CPR medium pass
Lsic02G0027980.1 Rosmarinic Acid HPPR medium pass
Lsic02G0028000.1 Rosmarinic Acid HPPR medium pass
Lsic02G0028010.1 Rosmarinic Acid HPPR medium pass
Lsic05G0019850.1 Rosmarinic Acid HPPR medium pass
Lsic05G0019860.1 Rosmarinic Acid HPPR medium pass
Lsic05G0019880.1 Rosmarinic Acid HPPR medium pass
Lsic05G0019950.1 Rosmarinic Acid HPPR medium pass
Lsic01G0013260.1 Rosmarinic Acid PAL high pass
Lsic01G0013280.1 Rosmarinic Acid PAL high pass
Lsic01G0013290.1 Rosmarinic Acid PAL high pass
Lsic01G0013300.1 Rosmarinic Acid PAL high pass
Lsic01G0013310.1 Rosmarinic Acid PAL high pass
Lsic01G0013320.1 Rosmarinic Acid PAL high pass
Lsic01G0013330.1 Rosmarinic Acid PAL high pass
Lsic06G0003090.1 Rosmarinic Acid PAL high pass
Lsic07G0003820.1 Rosmarinic Acid PAL medium pass
Lsic07G0003830.1 Rosmarinic Acid PAL medium pass
Lsic07G0003840.1 Rosmarinic Acid PAL high pass
Lsic07G0003850.1 Rosmarinic Acid PAL high pass
Lsic07G0003860.1 Rosmarinic Acid PAL high pass
Lsic08G0007150.1 Rosmarinic Acid PAL high pass
Lsic10G0012550.1 Rosmarinic Acid PAL high pass
Lsic01G0016750.1 Rosmarinic Acid RAS medium pass
Lsic02G0012860.1 Rosmarinic Acid RAS low borderline
Lsic02G0026580.1 Rosmarinic Acid RAS medium pass
Lsic02G0026590.1 Rosmarinic Acid RAS medium pass
Lsic02G0026600.1 Rosmarinic Acid RAS medium pass
Lsic02G0026610.1 Rosmarinic Acid RAS medium pass
Lsic04G0007240.1 Rosmarinic Acid RAS medium pass
Lsic04G0020840.1 Rosmarinic Acid RAS low borderline
Lsic04G0022820.1 Rosmarinic Acid RAS low borderline
Lsic05G0015290.1 Rosmarinic Acid RAS low borderline