PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic06G0008530.1 Rosmarinic Acid RAS low borderline
Lsic07G0010900.1 Rosmarinic Acid RAS low borderline
Lsic10G0000920.1 Rosmarinic Acid RAS low borderline
Lsic11G0009290.1 Rosmarinic Acid RAS medium pass
Lsic01G0015310.1 Rosmarinic Acid TAT low borderline
Lsic02G0002980.1 Rosmarinic Acid TAT medium pass
Lsic02G0003000.1 Rosmarinic Acid TAT medium pass
Lsic02G0004770.1 Rosmarinic Acid TAT medium pass
Lsic02G0027580.1 Rosmarinic Acid TAT low borderline
Lsic03G0003210.1 Rosmarinic Acid TAT low borderline
Lsic03G0003220.1 Rosmarinic Acid TAT low borderline
Lsic03G0003230.1 Rosmarinic Acid TAT low borderline
Lsic03G0010430.1 Rosmarinic Acid TAT medium pass
Lsic03G0010440.1 Rosmarinic Acid TAT low borderline
Lsic03G0010460.1 Rosmarinic Acid TAT medium pass
Lsic03G0010480.1 Rosmarinic Acid TAT medium pass
Lsic03G0021800.1 Rosmarinic Acid TAT low borderline
Lsic04G0006450.1 Rosmarinic Acid TAT medium pass
Lsic04G0006460.1 Rosmarinic Acid TAT medium pass
Lsic04G0006470.1 Rosmarinic Acid TAT medium pass
Lsic04G0016990.1 Rosmarinic Acid TAT low borderline
Lsic04G0020440.1 Rosmarinic Acid TAT medium pass
Lsic06G0016110.1 Rosmarinic Acid TAT medium pass
Lsic06G0016130.1 Rosmarinic Acid TAT medium pass
Lsic07G0007660.1 Rosmarinic Acid TAT low borderline
Lsic08G0016170.1 Rosmarinic Acid TAT medium pass
Lsic08G0016180.1 Rosmarinic Acid TAT medium pass
Lsic08G0016190.1 Rosmarinic Acid TAT medium pass
Lsic09G0017810.1 Rosmarinic Acid TAT medium pass
Lsic10G0016020.1 Rosmarinic Acid TAT medium pass
Lsic10G0016030.1 Rosmarinic Acid TAT medium pass
Lsic02G0013430.1 Steroid BR6OX1/CYP85A1 medium borderline
Lsic04G0014190.1 Steroid BR6OX1/CYP85A1 medium borderline
Lsic04G0015110.1 Steroid BR6OX1/CYP85A1 medium borderline
Lsic04G0015630.1 Steroid BR6OX1/CYP85A1 medium borderline
Lsic04G0016010.1 Steroid BR6OX1/CYP85A1 low borderline
Lsic07G0007760.1 Steroid BR6OX1/CYP85A1 medium borderline
Lsic07G0012200.1 Steroid BR6OX1/CYP85A1 medium borderline
Lsic07G0013810.1 Steroid BR6OX1/CYP85A1 low borderline
Lsic08G0014730.1 Steroid BR6OX1/CYP85A1 medium borderline
Lsic09G0003480.1 Steroid BR6OX1/CYP85A1 medium borderline
Lsic09G0003490.1 Steroid BR6OX1/CYP85A1 medium borderline
Lsic09G0003500.1 Steroid BR6OX1/CYP85A1 medium borderline
Lsic09G0003510.1 Steroid BR6OX1/CYP85A1 medium borderline
Lsic09G0017800.1 Steroid BR6OX1/CYP85A1 medium borderline
Lsic09G0018690.1 Steroid BR6OX1/CYP85A1 medium borderline
Lsic10G0001700.1 Steroid BR6OX1/CYP85A1 low borderline
Lsic10G0001720.1 Steroid BR6OX1/CYP85A1 medium borderline
Lsic00G0002110.1 Steroid BR6OX2/CYP85A2 low borderline
Lsic01G0004140.1 Steroid BR6OX2/CYP85A2 low borderline