PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic09G0018050.1 Alkaloid 8HGO medium borderline
Lsic10G0004240.1 Alkaloid ADC medium pass
Lsic01G0000540.1 Alkaloid BBE medium borderline
Lsic01G0000550.1 Alkaloid BBE medium borderline
Lsic01G0000560.1 Alkaloid BBE medium borderline
Lsic01G0000570.1 Alkaloid BBE medium borderline
Lsic01G0000580.1 Alkaloid BBE medium borderline
Lsic01G0000590.1 Alkaloid BBE medium borderline
Lsic01G0000600.1 Alkaloid BBE medium borderline
Lsic02G0009640.1 Alkaloid BBE medium borderline
Lsic02G0009650.1 Alkaloid BBE medium borderline
Lsic02G0009660.1 Alkaloid BBE medium borderline
Lsic02G0009670.1 Alkaloid BBE medium borderline
Lsic02G0009680.1 Alkaloid BBE medium borderline
Lsic02G0009690.1 Alkaloid BBE medium borderline
Lsic02G0009700.1 Alkaloid BBE medium borderline
Lsic02G0009710.1 Alkaloid BBE medium borderline
Lsic02G0009720.1 Alkaloid BBE medium borderline
Lsic02G0009730.1 Alkaloid BBE medium borderline
Lsic02G0009740.1 Alkaloid BBE medium borderline
Lsic02G0009750.1 Alkaloid BBE medium borderline
Lsic02G0009760.1 Alkaloid BBE medium borderline
Lsic02G0009770.1 Alkaloid BBE medium borderline
Lsic02G0009780.1 Alkaloid BBE medium borderline
Lsic02G0009790.1 Alkaloid BBE low borderline
Lsic02G0009800.1 Alkaloid BBE medium borderline
Lsic02G0009850.1 Alkaloid BBE medium borderline
Lsic02G0009860.1 Alkaloid BBE medium borderline
Lsic02G0014560.1 Alkaloid BBE medium borderline
Lsic03G0001460.1 Alkaloid BBE medium borderline
Lsic01G0006370.1 Alkaloid CNMT low borderline
Lsic03G0002010.1 Alkaloid CNMT low borderline
Lsic03G0008980.1 Alkaloid CNMT low borderline
Lsic04G0014050.1 Alkaloid CNMT medium borderline
Lsic04G0014060.1 Alkaloid CNMT medium borderline
Lsic05G0002780.1 Alkaloid CNMT low borderline
Lsic06G0016830.1 Alkaloid CNMT low borderline
Lsic09G0012060.1 Alkaloid CNMT low borderline
Lsic09G0012080.1 Alkaloid CNMT low borderline
Lsic09G0012090.1 Alkaloid CNMT low borderline
Lsic09G0012120.1 Alkaloid CNMT low borderline
Lsic10G0015120.1 Alkaloid CNMT low borderline
Lsic11G0004130.1 Alkaloid CNMT low borderline
Lsic01G0001480.1 Alkaloid CODM/T6ODM medium borderline
Lsic01G0001920.1 Alkaloid CODM/T6ODM medium borderline
Lsic01G0001930.1 Alkaloid CODM/T6ODM medium borderline
Lsic01G0001940.1 Alkaloid CODM/T6ODM medium borderline
Lsic01G0004650.1 Alkaloid CODM/T6ODM medium borderline
Lsic01G0011700.1 Alkaloid CODM/T6ODM medium borderline
Lsic02G0006300.1 Alkaloid CODM/T6ODM medium borderline