PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic10G0005180.1 Alkaloid 7DLGT medium pass
Lsic10G0005200.1 Alkaloid 7DLGT low borderline
Lsic10G0009460.1 Alkaloid 7DLGT low borderline
Lsic10G0009480.1 Alkaloid 7DLGT medium pass
Lsic10G0009490.1 Alkaloid 7DLGT low borderline
Lsic10G0009500.1 Alkaloid 7DLGT low borderline
Lsic10G0009510.1 Alkaloid 7DLGT low borderline
Lsic10G0009520.1 Alkaloid 7DLGT low borderline
Lsic10G0009530.1 Alkaloid 7DLGT low borderline
Lsic10G0010380.1 Alkaloid 7DLGT low borderline
Lsic10G0012410.1 Alkaloid 7DLGT low borderline
Lsic10G0014550.1 Alkaloid 7DLGT low borderline
Lsic10G0014560.1 Alkaloid 7DLGT low borderline
Lsic10G0014570.1 Alkaloid 7DLGT low borderline
Lsic11G0007350.1 Alkaloid 7DLGT low borderline
Lsic11G0013750.1 Alkaloid 7DLGT low borderline
Lsic11G0014160.1 Alkaloid 7DLGT low borderline
Lsic11G0014170.1 Alkaloid 7DLGT low borderline
Lsic11G0014180.1 Alkaloid 7DLGT low borderline
Lsic00G0002110.1 Alkaloid 7DLH medium borderline
Lsic01G0010710.1 Alkaloid 7DLH medium borderline
Lsic03G0014890.1 Alkaloid 7DLH medium borderline
Lsic03G0014910.1 Alkaloid 7DLH medium borderline
Lsic04G0016470.1 Alkaloid 7DLH medium borderline
Lsic04G0019570.1 Alkaloid 7DLH medium borderline
Lsic04G0019580.1 Alkaloid 7DLH medium borderline
Lsic04G0019600.1 Alkaloid 7DLH medium borderline
Lsic05G0000650.1 Alkaloid 7DLH low borderline
Lsic05G0000680.1 Alkaloid 7DLH low borderline
Lsic05G0003830.1 Alkaloid 7DLH medium borderline
Lsic05G0012180.1 Alkaloid 7DLH medium borderline
Lsic05G0012190.1 Alkaloid 7DLH low borderline
Lsic06G0003160.1 Alkaloid 7DLH medium borderline
Lsic06G0016370.1 Alkaloid 7DLH medium borderline
Lsic07G0012210.1 Alkaloid 7DLH low borderline
Lsic09G0002450.1 Alkaloid 7DLH medium borderline
Lsic09G0015720.1 Alkaloid 7DLH medium borderline
Lsic01G0010510.1 Alkaloid 8HGO low borderline
Lsic01G0020180.1 Alkaloid 8HGO low borderline
Lsic02G0002940.1 Alkaloid 8HGO medium borderline
Lsic02G0020080.1 Alkaloid 8HGO low borderline
Lsic02G0020090.1 Alkaloid 8HGO medium borderline
Lsic08G0008110.1 Alkaloid 8HGO medium pass
Lsic08G0008120.1 Alkaloid 8HGO low borderline
Lsic08G0008130.1 Alkaloid 8HGO low borderline
Lsic08G0008140.1 Alkaloid 8HGO medium pass
Lsic08G0008150.1 Alkaloid 8HGO medium borderline
Lsic08G0008160.1 Alkaloid 8HGO medium borderline
Lsic08G0009830.1 Alkaloid 8HGO medium borderline
Lsic09G0001320.1 Alkaloid 8HGO medium borderline