PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic11G0004720.1 Steroid CAS medium pass
Lsic11G0004930.1 Steroid CAS medium pass
Lsic11G0004940.1 Steroid CAS medium pass
Lsic11G0015870.1 Steroid CAS low borderline
Lsic01G0009420.1 Steroid CPD/CYP90A1 low borderline
Lsic01G0010720.1 Steroid CPD/CYP90A1 low borderline
Lsic01G0012770.1 Steroid CPD/CYP90A1 low borderline
Lsic03G0004920.1 Steroid CPD/CYP90A1 medium borderline
Lsic03G0016320.1 Steroid CPD/CYP90A1 low borderline
Lsic04G0001330.1 Steroid CPD/CYP90A1 medium borderline
Lsic04G0006180.1 Steroid CPD/CYP90A1 medium borderline
Lsic04G0006200.1 Steroid CPD/CYP90A1 medium borderline
Lsic04G0016220.1 Steroid CPD/CYP90A1 medium borderline
Lsic05G0008060.1 Steroid CPD/CYP90A1 low borderline
Lsic05G0009820.1 Steroid CPD/CYP90A1 low borderline
Lsic09G0003730.1 Steroid CPD/CYP90A1 low borderline
Lsic09G0003840.1 Steroid CPD/CYP90A1 medium borderline
Lsic02G0004970.1 Steroid CPI1 medium pass
Lsic02G0004980.1 Steroid CPI1 low borderline
Lsic04G0008030.1 Steroid CPI1 low borderline
Lsic00G0001970.1 Steroid CYP51G1 medium borderline
Lsic02G0004280.1 Steroid CYP51G1 medium borderline
Lsic02G0004300.1 Steroid CYP51G1 medium borderline
Lsic02G0004330.1 Steroid CYP51G1 medium borderline
Lsic02G0004370.1 Steroid CYP51G1 medium borderline
Lsic02G0004390.1 Steroid CYP51G1 medium borderline
Lsic02G0004420.1 Steroid CYP51G1 medium borderline
Lsic04G0006160.1 Steroid CYP51G1 medium borderline
Lsic04G0006170.1 Steroid CYP51G1 medium borderline
Lsic06G0015910.1 Steroid CYP51G1 medium borderline
Lsic07G0002250.1 Steroid CYP51G1 medium borderline
Lsic07G0003900.1 Steroid CYP51G1 medium borderline
Lsic09G0003810.1 Steroid CYP51G1 medium borderline
Lsic09G0003830.1 Steroid CYP51G1 medium borderline
Lsic11G0000900.1 Steroid CYP51G1 medium borderline
Lsic11G0008150.1 Steroid CYP51G1 medium borderline
Lsic11G0008160.1 Steroid CYP51G1 medium borderline
Lsic11G0008170.1 Steroid CYP51G1 medium borderline
Lsic11G0011330.1 Steroid CYP51G1 medium borderline
Lsic01G0006380.1 Steroid CYP90D1 medium borderline
Lsic01G0007190.1 Steroid CYP90D1 low borderline
Lsic02G0001310.1 Steroid CYP90D1 low borderline
Lsic02G0004270.1 Steroid CYP90D1 low borderline
Lsic02G0020170.1 Steroid CYP90D1 medium borderline
Lsic02G0020570.1 Steroid CYP90D1 low borderline
Lsic02G0029440.1 Steroid CYP90D1 medium borderline
Lsic03G0012180.1 Steroid CYP90D1 low borderline
Lsic03G0012190.1 Steroid CYP90D1 low borderline
Lsic03G0017130.1 Steroid CYP90D1 low borderline
Lsic03G0017140.1 Steroid CYP90D1 low borderline