PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic03G0019480.1 Steroid CYP90D1 low borderline
Lsic04G0009720.1 Steroid CYP90D1 medium borderline
Lsic04G0012090.1 Steroid CYP90D1 medium pass
Lsic04G0012100.1 Steroid CYP90D1 medium borderline
Lsic04G0016080.1 Steroid CYP90D1 low borderline
Lsic04G0016100.1 Steroid CYP90D1 low borderline
Lsic04G0016150.1 Steroid CYP90D1 low borderline
Lsic04G0016160.1 Steroid CYP90D1 low borderline
Lsic04G0016300.1 Steroid CYP90D1 low borderline
Lsic04G0016460.1 Steroid CYP90D1 low borderline
Lsic05G0005560.1 Steroid CYP90D1 low borderline
Lsic05G0010630.1 Steroid CYP90D1 low borderline
Lsic05G0010650.1 Steroid CYP90D1 low borderline
Lsic06G0009380.1 Steroid CYP90D1 low borderline
Lsic06G0012570.1 Steroid CYP90D1 medium borderline
Lsic06G0014210.1 Steroid CYP90D1 low borderline
Lsic07G0002050.1 Steroid CYP90D1 medium borderline
Lsic07G0005640.1 Steroid CYP90D1 medium borderline
Lsic07G0013880.1 Steroid CYP90D1 medium borderline
Lsic08G0013780.1 Steroid CYP90D1 medium borderline
Lsic09G0003470.1 Steroid CYP90D1 low borderline
Lsic09G0005890.1 Steroid CYP90D1 low borderline
Lsic09G0011100.1 Steroid CYP90D1 low borderline
Lsic09G0011300.1 Steroid CYP90D1 low borderline
Lsic01G0014210.1 Steroid DET2 low borderline
Lsic02G0016350.1 Steroid DET2 low borderline
Lsic03G0021740.1 Steroid DET2 low borderline
Lsic04G0001750.1 Steroid DET2 low borderline
Lsic11G0011460.1 Steroid DET2 low borderline
Lsic02G0025230.1 Steroid DWF1 medium pass
Lsic05G0013210.1 Steroid DWF1 low borderline
Lsic07G0010030.1 Steroid DWF1 medium pass
Lsic01G0001570.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0005000.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0007120.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0007160.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0007170.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0007200.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0007210.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0007220.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0009410.1 Steroid DWF4/CYP90B1 low borderline
Lsic01G0009440.1 Steroid DWF4/CYP90B1 low borderline
Lsic02G0002970.1 Steroid DWF4/CYP90B1 medium borderline
Lsic02G0004260.1 Steroid DWF4/CYP90B1 low borderline
Lsic02G0004360.1 Steroid DWF4/CYP90B1 low borderline
Lsic02G0016080.1 Steroid DWF4/CYP90B1 medium borderline
Lsic03G0001090.1 Steroid DWF4/CYP90B1 low borderline
Lsic03G0001830.1 Steroid DWF4/CYP90B1 medium borderline
Lsic03G0002430.1 Steroid DWF4/CYP90B1 low borderline
Lsic03G0012760.1 Steroid DWF4/CYP90B1 medium borderline