PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lsic05G0019860.1 Rosmarinic Acid HPPR medium pass
Lsic05G0019880.1 Rosmarinic Acid HPPR medium pass
Lsic05G0019950.1 Rosmarinic Acid HPPR medium pass
Lsic01G0013260.1 Rosmarinic Acid PAL high pass
Lsic01G0013280.1 Rosmarinic Acid PAL high pass
Lsic01G0013290.1 Rosmarinic Acid PAL high pass
Lsic01G0013300.1 Rosmarinic Acid PAL high pass
Lsic01G0013310.1 Rosmarinic Acid PAL high pass
Lsic01G0013320.1 Rosmarinic Acid PAL high pass
Lsic01G0013330.1 Rosmarinic Acid PAL high pass
Lsic06G0003090.1 Rosmarinic Acid PAL high pass
Lsic07G0003820.1 Rosmarinic Acid PAL medium pass
Lsic07G0003830.1 Rosmarinic Acid PAL medium pass
Lsic07G0003840.1 Rosmarinic Acid PAL high pass
Lsic07G0003850.1 Rosmarinic Acid PAL high pass
Lsic07G0003860.1 Rosmarinic Acid PAL high pass
Lsic08G0007150.1 Rosmarinic Acid PAL high pass
Lsic10G0012550.1 Rosmarinic Acid PAL high pass
Lsic01G0016750.1 Rosmarinic Acid RAS medium pass
Lsic02G0012860.1 Rosmarinic Acid RAS low borderline
Lsic02G0026580.1 Rosmarinic Acid RAS medium pass
Lsic02G0026590.1 Rosmarinic Acid RAS medium pass
Lsic02G0026600.1 Rosmarinic Acid RAS medium pass
Lsic02G0026610.1 Rosmarinic Acid RAS medium pass
Lsic04G0007240.1 Rosmarinic Acid RAS medium pass
Lsic04G0020840.1 Rosmarinic Acid RAS low borderline
Lsic04G0022820.1 Rosmarinic Acid RAS low borderline
Lsic05G0015290.1 Rosmarinic Acid RAS low borderline
Lsic06G0008530.1 Rosmarinic Acid RAS low borderline
Lsic07G0010900.1 Rosmarinic Acid RAS low borderline
Lsic10G0000920.1 Rosmarinic Acid RAS low borderline
Lsic11G0009290.1 Rosmarinic Acid RAS medium pass
Lsic01G0015310.1 Rosmarinic Acid TAT low borderline
Lsic02G0002980.1 Rosmarinic Acid TAT medium pass
Lsic02G0003000.1 Rosmarinic Acid TAT medium pass
Lsic02G0004770.1 Rosmarinic Acid TAT medium pass
Lsic02G0027580.1 Rosmarinic Acid TAT low borderline
Lsic03G0003210.1 Rosmarinic Acid TAT low borderline
Lsic03G0003220.1 Rosmarinic Acid TAT low borderline
Lsic03G0003230.1 Rosmarinic Acid TAT low borderline
Lsic03G0010430.1 Rosmarinic Acid TAT medium pass
Lsic03G0010440.1 Rosmarinic Acid TAT low borderline
Lsic03G0010460.1 Rosmarinic Acid TAT medium pass
Lsic03G0010480.1 Rosmarinic Acid TAT medium pass
Lsic03G0021800.1 Rosmarinic Acid TAT low borderline
Lsic04G0006450.1 Rosmarinic Acid TAT medium pass
Lsic04G0006460.1 Rosmarinic Acid TAT medium pass
Lsic04G0006470.1 Rosmarinic Acid TAT medium pass
Lsic04G0016990.1 Rosmarinic Acid TAT low borderline
Lsic04G0020440.1 Rosmarinic Acid TAT medium pass