PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1315
Family-Level Assignments
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Lsic09G0003810.1 Rosmarinic Acid C4H medium pass
Lsic09G0003820.1 Rosmarinic Acid C4H low borderline
Lsic09G0003830.1 Rosmarinic Acid C4H medium pass
Lsic09G0003840.1 Rosmarinic Acid C4H medium pass
Lsic09G0003850.1 Rosmarinic Acid C4H low borderline
Lsic09G0005820.1 Rosmarinic Acid C4H low borderline
Lsic09G0005830.1 Rosmarinic Acid C4H medium pass
Lsic09G0005880.1 Rosmarinic Acid C4H low borderline
Lsic09G0005890.1 Rosmarinic Acid C4H low borderline
Lsic09G0011100.1 Rosmarinic Acid C4H low borderline
Lsic09G0011300.1 Rosmarinic Acid C4H low borderline
Lsic09G0015330.1 Rosmarinic Acid C4H low borderline
Lsic09G0016570.1 Rosmarinic Acid C4H low borderline
Lsic09G0017850.1 Rosmarinic Acid C4H low borderline
Lsic09G0017870.1 Rosmarinic Acid C4H low borderline
Lsic09G0017880.1 Rosmarinic Acid C4H low borderline
Lsic10G0001640.1 Rosmarinic Acid C4H low borderline
Lsic10G0001650.1 Rosmarinic Acid C4H low borderline
Lsic10G0001660.1 Rosmarinic Acid C4H low borderline
Lsic10G0001680.1 Rosmarinic Acid C4H medium pass
Lsic10G0001690.1 Rosmarinic Acid C4H low borderline
Lsic10G0001700.1 Rosmarinic Acid C4H medium pass
Lsic10G0001710.1 Rosmarinic Acid C4H low borderline
Lsic10G0001720.1 Rosmarinic Acid C4H medium pass
Lsic10G0001770.1 Rosmarinic Acid C4H low borderline
Lsic10G0002200.1 Rosmarinic Acid C4H low borderline
Lsic10G0002460.1 Rosmarinic Acid C4H low borderline
Lsic10G0002470.1 Rosmarinic Acid C4H low borderline
Lsic10G0002480.1 Rosmarinic Acid C4H low borderline
Lsic10G0002500.1 Rosmarinic Acid C4H low borderline
Lsic10G0002510.1 Rosmarinic Acid C4H medium pass
Lsic10G0002520.1 Rosmarinic Acid C4H low borderline
Lsic10G0006810.1 Rosmarinic Acid C4H medium pass
Lsic10G0014870.1 Rosmarinic Acid C4H medium pass
Lsic11G0000820.1 Rosmarinic Acid C4H medium pass
Lsic11G0000900.1 Rosmarinic Acid C4H medium pass
Lsic11G0002960.1 Rosmarinic Acid C4H low borderline
Lsic11G0008150.1 Rosmarinic Acid C4H medium pass
Lsic11G0008160.1 Rosmarinic Acid C4H medium pass
Lsic11G0008170.1 Rosmarinic Acid C4H medium pass
Lsic11G0011330.1 Rosmarinic Acid C4H medium pass
Lsic01G0015570.1 Rosmarinic Acid CPR medium pass
Lsic03G0022310.1 Rosmarinic Acid CPR low borderline
Lsic06G0011760.1 Rosmarinic Acid CPR medium pass
Lsic07G0001270.1 Rosmarinic Acid CPR medium pass
Lsic11G0007580.1 Rosmarinic Acid CPR medium pass
Lsic02G0027980.1 Rosmarinic Acid HPPR medium pass
Lsic02G0028000.1 Rosmarinic Acid HPPR medium pass
Lsic02G0028010.1 Rosmarinic Acid HPPR medium pass
Lsic05G0019850.1 Rosmarinic Acid HPPR medium pass