PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic09G0016570.1 Terpenoid CYP76 medium pass
Lsic09G0017850.1 Terpenoid CYP76 medium pass
Lsic09G0017870.1 Terpenoid CYP76 medium pass
Lsic09G0017880.1 Terpenoid CYP76 medium pass
Lsic10G0001640.1 Terpenoid CYP76 medium pass
Lsic10G0001650.1 Terpenoid CYP76 medium pass
Lsic10G0001660.1 Terpenoid CYP76 low borderline
Lsic10G0001680.1 Terpenoid CYP76 medium pass
Lsic10G0001690.1 Terpenoid CYP76 low borderline
Lsic10G0001700.1 Terpenoid CYP76 medium pass
Lsic10G0001720.1 Terpenoid CYP76 medium borderline
Lsic10G0001770.1 Terpenoid CYP76 medium borderline
Lsic10G0002200.1 Terpenoid CYP76 low borderline
Lsic10G0002460.1 Terpenoid CYP76 medium pass
Lsic10G0002470.1 Terpenoid CYP76 medium pass
Lsic10G0002480.1 Terpenoid CYP76 low borderline
Lsic10G0002500.1 Terpenoid CYP76 low borderline
Lsic10G0002510.1 Terpenoid CYP76 medium borderline
Lsic10G0002520.1 Terpenoid CYP76 medium pass
Lsic10G0004220.1 Terpenoid CYP76 low borderline
Lsic10G0006810.1 Terpenoid CYP76 medium borderline
Lsic10G0014870.1 Terpenoid CYP76 medium pass
Lsic11G0000820.1 Terpenoid CYP76 medium borderline
Lsic11G0000900.1 Terpenoid CYP76 medium borderline
Lsic11G0002960.1 Terpenoid CYP76 low borderline
Lsic11G0008150.1 Terpenoid CYP76 low borderline
Lsic11G0008160.1 Terpenoid CYP76 medium pass
Lsic11G0008170.1 Terpenoid CYP76 medium pass
Lsic11G0010520.1 Terpenoid CYP76 low borderline
Lsic11G0011330.1 Terpenoid CYP76 medium borderline
Lsic06G0015510.1 Terpenoid DXR high pass
Lsic05G0007850.1 Terpenoid DXS medium pass
Lsic05G0007860.1 Terpenoid DXS medium pass
Lsic05G0007910.1 Terpenoid DXS medium pass
Lsic06G0011100.1 Terpenoid DXS medium pass
Lsic08G0011690.1 Terpenoid DXS medium pass
Lsic09G0013840.1 Terpenoid DXS medium pass
Lsic02G0011800.1 Terpenoid FPPS medium pass
Lsic02G0018110.1 Terpenoid FPPS low borderline
Lsic03G0006950.1 Terpenoid FPPS medium pass
Lsic05G0003400.1 Terpenoid FPPS medium pass
Lsic10G0014310.1 Terpenoid FPPS medium pass
Lsic01G0001230.1 Terpenoid GGPPS medium borderline
Lsic01G0010540.1 Terpenoid GGPPS medium borderline
Lsic02G0018990.1 Terpenoid GGPPS medium borderline
Lsic07G0008680.1 Terpenoid GGPPS low borderline
Lsic10G0006550.1 Terpenoid GGPPS medium borderline
Lsic11G0012280.1 Terpenoid GGPPS medium borderline
Lsic10G0003390.1 Terpenoid HDR/IspH high pass
Lsic11G0010600.1 Terpenoid HDR/IspH high pass