PlantSME Plant secondary metabolism enzyme database

Lagenaria siceraria (lagenaria_siceraria)

Imported from atlas release summary for Lagenaria siceraria.

1501
Candidate Protein Records
1315
Pathway-Level Records
3311
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 387 19 UGT (133) View species results
Alkaloid pathway 279 22 7DLGT (61) View species results
Phenylpropanoid pathway 245 11 POD (97) View species results
Flavonoid pathway 203 12 UFGT (123) View species results
Rosmarinic acid pathway 127 7 C4H (51) View species results
Steroid pathway 74 11 CAS (37) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 1342 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 212 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lsic02G0014180.1 Terpenoid HDS/IspG high pass
Lsic07G0014250.1 Terpenoid HMGR low borderline
Lsic08G0007640.1 Terpenoid HMGR medium pass
Lsic10G0000120.1 Terpenoid HMGR medium pass
Lsic11G0013120.1 Terpenoid HMGR medium pass
Lsic07G0013770.1 Terpenoid HMGS high pass
Lsic06G0006930.1 Terpenoid IDI medium pass
Lsic11G0008720.1 Terpenoid IDI medium pass
Lsic05G0007660.1 Terpenoid MCT/IspD high pass
Lsic05G0007670.1 Terpenoid MCT/IspD low borderline
Lsic01G0003220.1 Terpenoid MDS/IspF low borderline
Lsic07G0009020.1 Terpenoid MDS/IspF high pass
Lsic03G0012440.1 Terpenoid MVD low borderline
Lsic04G0001430.1 Terpenoid MVD medium pass
Lsic08G0006500.1 Terpenoid MVD low borderline
Lsic05G0014100.1 Terpenoid MVK low borderline
Lsic05G0021450.1 Terpenoid MVK low borderline
Lsic11G0004590.1 Terpenoid MVK low borderline
Lsic11G0005310.1 Terpenoid MVK medium pass
Lsic11G0012940.1 Terpenoid MVK low borderline
Lsic00G0000050.1 Terpenoid PMK medium pass
Lsic02G0003330.1 Terpenoid PMK low borderline
Lsic02G0016030.1 Terpenoid PMK low borderline
Lsic07G0011560.1 Terpenoid PMK medium pass
Lsic00G0001880.1 Terpenoid TPS medium pass
Lsic01G0020690.1 Terpenoid TPS medium pass
Lsic02G0006650.1 Terpenoid TPS medium pass
Lsic02G0006660.1 Terpenoid TPS medium pass
Lsic02G0006670.1 Terpenoid TPS medium pass
Lsic02G0006680.1 Terpenoid TPS medium pass
Lsic02G0006690.1 Terpenoid TPS low borderline
Lsic04G0011470.1 Terpenoid TPS medium pass
Lsic05G0006530.1 Terpenoid TPS medium pass
Lsic05G0006540.1 Terpenoid TPS medium pass
Lsic05G0006550.1 Terpenoid TPS medium pass
Lsic05G0006560.1 Terpenoid TPS medium pass
Lsic05G0006570.1 Terpenoid TPS medium pass
Lsic05G0006580.1 Terpenoid TPS medium pass
Lsic05G0006590.1 Terpenoid TPS medium pass
Lsic05G0006600.1 Terpenoid TPS medium pass
Lsic05G0006610.1 Terpenoid TPS medium pass
Lsic05G0006620.1 Terpenoid TPS medium pass
Lsic05G0008690.1 Terpenoid TPS medium pass
Lsic05G0008750.1 Terpenoid TPS medium pass
Lsic05G0009380.1 Terpenoid TPS medium pass
Lsic07G0013100.1 Terpenoid TPS medium pass
Lsic07G0013980.1 Terpenoid TPS medium pass
Lsic07G0013990.1 Terpenoid TPS medium pass
Lsic07G0014000.1 Terpenoid TPS medium pass
Lsic07G0014010.1 Terpenoid TPS low borderline