PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold280168760.1 Phenylpropanoid CAD low borderline
Lusiscaffold280172060.1 Phenylpropanoid CAD medium pass
Lusiscaffold2880179930.1 Phenylpropanoid CAD low borderline
Lusiscaffold2950188560.1 Phenylpropanoid CAD low borderline
Lusiscaffold3100203330.1 Phenylpropanoid CAD low borderline
Lusiscaffold3100203360.1 Phenylpropanoid CAD low borderline
Lusiscaffold3190210960.1 Phenylpropanoid CAD medium borderline
Lusiscaffold3190210980.1 Phenylpropanoid CAD low borderline
Lusiscaffold3190211780.1 Phenylpropanoid CAD medium borderline
Lusiscaffold3190211790.1 Phenylpropanoid CAD low borderline
Lusiscaffold3530234640.1 Phenylpropanoid CAD low borderline
Lusiscaffold3530234740.1 Phenylpropanoid CAD low borderline
Lusiscaffold3580236450.1 Phenylpropanoid CAD low borderline
Lusiscaffold3730247710.1 Phenylpropanoid CAD low borderline
Lusiscaffold3760248910.1 Phenylpropanoid CAD low borderline
Lusiscaffold380252900.1 Phenylpropanoid CAD low borderline
Lusiscaffold4180264270.1 Phenylpropanoid CAD low borderline
Lusiscaffold4200268360.1 Phenylpropanoid CAD medium borderline
Lusiscaffold4200268380.1 Phenylpropanoid CAD medium borderline
Lusiscaffold430272140.1 Phenylpropanoid CAD low borderline
Lusiscaffold4880300520.1 Phenylpropanoid CAD low borderline
Lusiscaffold4900303140.1 Phenylpropanoid CAD low borderline
Lusiscaffold4900303150.1 Phenylpropanoid CAD low borderline
Lusiscaffold5110309620.1 Phenylpropanoid CAD medium pass
Lusiscaffold5470317910.1 Phenylpropanoid CAD low borderline
Lusiscaffold550318360.1 Phenylpropanoid CAD medium borderline
Lusiscaffold550319010.1 Phenylpropanoid CAD low borderline
Lusiscaffold5720324830.1 Phenylpropanoid CAD low borderline
Lusiscaffold5750325640.1 Phenylpropanoid CAD medium pass
Lusiscaffold5840326610.1 Phenylpropanoid CAD low borderline
Lusiscaffold5870327690.1 Phenylpropanoid CAD medium pass
Lusiscaffold6050333530.1 Phenylpropanoid CAD medium pass
Lusiscaffold6050335450.1 Phenylpropanoid CAD low borderline
Lusiscaffold6050335460.1 Phenylpropanoid CAD low borderline
Lusiscaffold6410346890.1 Phenylpropanoid CAD low borderline
Lusiscaffold670353300.1 Phenylpropanoid CAD low borderline
Lusiscaffold670355240.1 Phenylpropanoid CAD low borderline
Lusiscaffold7010362420.1 Phenylpropanoid CAD low borderline
Lusiscaffold7060363750.1 Phenylpropanoid CAD medium pass
Lusiscaffold760374550.1 Phenylpropanoid CAD medium pass
Lusiscaffold80385920.1 Phenylpropanoid CAD low borderline
Lusiscaffold8100387850.1 Phenylpropanoid CAD medium pass
Lusiscaffold8580394300.1 Phenylpropanoid CAD low borderline
Lusiscaffold8630403060.1 Phenylpropanoid CAD low borderline
Lusiscaffold870405780.1 Phenylpropanoid CAD low borderline
Lusiscaffold8980409180.1 Phenylpropanoid CAD medium borderline
Lusiscaffold9170420660.1 Phenylpropanoid CAD low borderline
Lusiscaffold980431310.1 Phenylpropanoid CAD medium pass
Lusiscaffold11550023490.1 Phenylpropanoid CCR medium pass
Lusiscaffold11550023500.1 Phenylpropanoid CCR medium borderline