PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold11550023510.1 Phenylpropanoid CCR medium pass
Lusiscaffold1510070960.1 Phenylpropanoid CCR medium borderline
Lusiscaffold2250131070.1 Phenylpropanoid CCR medium pass
Lusiscaffold2300134940.1 Phenylpropanoid CCR low borderline
Lusiscaffold2610153570.1 Phenylpropanoid CCR medium borderline
Lusiscaffold2720160310.1 Phenylpropanoid CCR medium borderline
Lusiscaffold2800173510.1 Phenylpropanoid CCR medium borderline
Lusiscaffold2910183440.1 Phenylpropanoid CCR low borderline
Lusiscaffold3150207300.1 Phenylpropanoid CCR low borderline
Lusiscaffold3290217090.1 Phenylpropanoid CCR medium borderline
Lusiscaffold3530234120.1 Phenylpropanoid CCR medium borderline
Lusiscaffold3530234820.1 Phenylpropanoid CCR medium borderline
Lusiscaffold370242750.1 Phenylpropanoid CCR low borderline
Lusiscaffold430269900.1 Phenylpropanoid CCR medium borderline
Lusiscaffold4340273980.1 Phenylpropanoid CCR medium borderline
Lusiscaffold4750296240.1 Phenylpropanoid CCR low borderline
Lusiscaffold5810326150.1 Phenylpropanoid CCR low borderline
Lusiscaffold7290367380.1 Phenylpropanoid CCR medium pass
Lusiscaffold7290367390.1 Phenylpropanoid CCR low borderline
Lusiscaffold7320368260.1 Phenylpropanoid CCR low borderline
Lusiscaffold7790381810.1 Phenylpropanoid CCR medium pass
Lusiscaffold8060387170.1 Phenylpropanoid CCR medium borderline
Lusiscaffold8980410300.1 Phenylpropanoid CCR medium borderline
Lusiscaffold1080013010.1 Phenylpropanoid CCoAOMT medium pass
Lusiscaffold11430022430.1 Phenylpropanoid CCoAOMT medium pass
Lusiscaffold12470041470.1 Phenylpropanoid CCoAOMT medium pass
Lusiscaffold14910064790.1 Phenylpropanoid CCoAOMT medium pass
Lusiscaffold4340273810.1 Phenylpropanoid CCoAOMT medium pass
Lusiscaffold570321140.1 Phenylpropanoid CCoAOMT medium pass
Lusiscaffold7320367910.1 Phenylpropanoid CCoAOMT medium pass
Lusiscaffold8100388100.1 Phenylpropanoid CCoAOMT medium pass
Lusiscaffold90411520.1 Phenylpropanoid CCoAOMT medium pass
Lusiscaffold9810433300.1 Phenylpropanoid CCoAOMT medium pass
Lusiscaffold1090013830.1 Phenylpropanoid COMT medium pass
Lusiscaffold1160024100.1 Phenylpropanoid COMT low borderline
Lusiscaffold13080046360.1 Phenylpropanoid COMT low borderline
Lusiscaffold13080047380.1 Phenylpropanoid COMT medium pass
Lusiscaffold13080047390.1 Phenylpropanoid COMT medium pass
Lusiscaffold13470052720.1 Phenylpropanoid COMT medium pass
Lusiscaffold13470052730.1 Phenylpropanoid COMT low borderline
Lusiscaffold13470052740.1 Phenylpropanoid COMT medium pass
Lusiscaffold1410059210.1 Phenylpropanoid COMT medium pass
Lusiscaffold150068320.1 Phenylpropanoid COMT low borderline
Lusiscaffold150069520.1 Phenylpropanoid COMT low borderline
Lusiscaffold1760097520.1 Phenylpropanoid COMT medium pass
Lusiscaffold1770098810.1 Phenylpropanoid COMT medium pass
Lusiscaffold1770099750.1 Phenylpropanoid COMT medium pass
Lusiscaffold1770099760.1 Phenylpropanoid COMT medium pass
Lusiscaffold1840104200.1 Phenylpropanoid COMT medium pass
Lusiscaffold21030122150.1 Phenylpropanoid COMT low borderline