PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold2170125030.1 Phenylpropanoid COMT medium pass
Lusiscaffold2170125040.1 Phenylpropanoid COMT medium pass
Lusiscaffold2330137870.1 Phenylpropanoid COMT medium pass
Lusiscaffold2350138390.1 Phenylpropanoid COMT medium pass
Lusiscaffold280170010.1 Phenylpropanoid COMT medium pass
Lusiscaffold2910182790.1 Phenylpropanoid COMT medium pass
Lusiscaffold29320187230.1 Phenylpropanoid COMT medium pass
Lusiscaffold29320187240.1 Phenylpropanoid COMT low borderline
Lusiscaffold29740190520.1 Phenylpropanoid COMT medium pass
Lusiscaffold3050196220.1 Phenylpropanoid COMT medium pass
Lusiscaffold3050196230.1 Phenylpropanoid COMT medium pass
Lusiscaffold3700243620.1 Phenylpropanoid COMT medium pass
Lusiscaffold4610281990.1 Phenylpropanoid COMT low borderline
Lusiscaffold4730294110.1 Phenylpropanoid COMT low borderline
Lusiscaffold510307930.1 Phenylpropanoid COMT medium pass
Lusiscaffold5840326990.1 Phenylpropanoid COMT low borderline
Lusiscaffold7010362520.1 Phenylpropanoid COMT medium pass
Lusiscaffold7010362540.1 Phenylpropanoid COMT medium pass
Lusiscaffold7010362550.1 Phenylpropanoid COMT medium pass
Lusiscaffold760373810.1 Phenylpropanoid COMT low borderline
Lusiscaffold7650378210.1 Phenylpropanoid COMT low borderline
Lusiscaffold7650378250.1 Phenylpropanoid COMT medium pass
Lusiscaffold7650378290.1 Phenylpropanoid COMT medium pass
Lusiscaffold8200391000.1 Phenylpropanoid COMT medium pass
Lusiscaffold8210392020.1 Phenylpropanoid COMT low borderline
Lusiscaffold8350393120.1 Phenylpropanoid COMT low borderline
Lusiscaffold9240422220.1 Phenylpropanoid COMT medium pass
Lusiscaffold9810432880.1 Phenylpropanoid COMT medium pass
Lusiscaffold10100004320.1 Phenylpropanoid CSE medium pass
Lusiscaffold10100004470.1 Phenylpropanoid CSE medium pass
Lusiscaffold11430022320.1 Phenylpropanoid CSE medium pass
Lusiscaffold1200030920.1 Phenylpropanoid CSE medium pass
Lusiscaffold12020031290.1 Phenylpropanoid CSE medium pass
Lusiscaffold12160032860.1 Phenylpropanoid CSE low borderline
Lusiscaffold1230036350.1 Phenylpropanoid CSE medium pass
Lusiscaffold1230038520.1 Phenylpropanoid CSE medium pass
Lusiscaffold12470041600.1 Phenylpropanoid CSE medium pass
Lusiscaffold12530043110.1 Phenylpropanoid CSE medium pass
Lusiscaffold1260043980.1 Phenylpropanoid CSE medium pass
Lusiscaffold13170049270.1 Phenylpropanoid CSE medium pass
Lusiscaffold13760054730.1 Phenylpropanoid CSE medium pass
Lusiscaffold14910064650.1 Phenylpropanoid CSE medium pass
Lusiscaffold150069890.1 Phenylpropanoid CSE medium pass
Lusiscaffold15360074610.2 Phenylpropanoid CSE medium pass
Lusiscaffold15360074620.1 Phenylpropanoid CSE medium pass
Lusiscaffold160083980.1 Phenylpropanoid CSE medium pass
Lusiscaffold160084050.1 Phenylpropanoid CSE medium pass
Lusiscaffold1690093890.1 Phenylpropanoid CSE medium pass
Lusiscaffold2170126820.1 Phenylpropanoid CSE medium pass
Lusiscaffold2510148740.1 Phenylpropanoid CSE medium pass