PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold2720158210.1 Phenylpropanoid CSE medium pass
Lusiscaffold2720161680.1 Phenylpropanoid CSE medium pass
Lusiscaffold2800177190.1 Phenylpropanoid CSE medium pass
Lusiscaffold2910183810.1 Phenylpropanoid CSE medium pass
Lusiscaffold3030194440.1 Phenylpropanoid CSE medium pass
Lusiscaffold3030194450.1 Phenylpropanoid CSE medium pass
Lusiscaffold3030194520.1 Phenylpropanoid CSE medium pass
Lusiscaffold3030194530.1 Phenylpropanoid CSE medium pass
Lusiscaffold3030194560.1 Phenylpropanoid CSE medium pass
Lusiscaffold3060197880.1 Phenylpropanoid CSE medium pass
Lusiscaffold3100204350.1 Phenylpropanoid CSE medium pass
Lusiscaffold3170209010.1 Phenylpropanoid CSE medium pass
Lusiscaffold3190210990.1 Phenylpropanoid CSE medium pass
Lusiscaffold3460229500.1 Phenylpropanoid CSE low borderline
Lusiscaffold3720244700.1 Phenylpropanoid CSE medium pass
Lusiscaffold3730246200.1 Phenylpropanoid CSE medium pass
Lusiscaffold4130259110.1 Phenylpropanoid CSE medium pass
Lusiscaffold4130259120.1 Phenylpropanoid CSE medium pass
Lusiscaffold4160259630.1 Phenylpropanoid CSE medium pass
Lusiscaffold4160259780.1 Phenylpropanoid CSE medium pass
Lusiscaffold4180263170.1 Phenylpropanoid CSE medium pass
Lusiscaffold4180263260.1 Phenylpropanoid CSE medium pass
Lusiscaffold4500277550.1 Phenylpropanoid CSE medium pass
Lusiscaffold460280260.1 Phenylpropanoid CSE medium pass
Lusiscaffold4610281870.1 Phenylpropanoid CSE medium pass
Lusiscaffold4730293800.1 Phenylpropanoid CSE medium pass
Lusiscaffold4880302390.1 Phenylpropanoid CSE medium pass
Lusiscaffold5400314380.1 Phenylpropanoid CSE medium pass
Lusiscaffold570323050.1 Phenylpropanoid CSE medium pass
Lusiscaffold6050334010.1 Phenylpropanoid CSE medium pass
Lusiscaffold660351750.1 Phenylpropanoid CSE medium pass
Lusiscaffold670354280.1 Phenylpropanoid CSE medium pass
Lusiscaffold670354300.1 Phenylpropanoid CSE medium pass
Lusiscaffold6870359430.1 Phenylpropanoid CSE medium pass
Lusiscaffold7010362300.1 Phenylpropanoid CSE medium pass
Lusiscaffold7430370500.1 Phenylpropanoid CSE medium pass
Lusiscaffold760374080.1 Phenylpropanoid CSE medium pass
Lusiscaffold760376610.1 Phenylpropanoid CSE low borderline
Lusiscaffold7620376900.1 Phenylpropanoid CSE medium pass
Lusiscaffold7650377310.1 Phenylpropanoid CSE medium pass
Lusiscaffold7650378040.1 Phenylpropanoid CSE medium pass
Lusiscaffold8100388000.1 Phenylpropanoid CSE medium pass
Lusiscaffold8260392250.1 Phenylpropanoid CSE medium pass
Lusiscaffold8600399550.1 Phenylpropanoid CSE low borderline
Lusiscaffold860397650.1 Phenylpropanoid CSE medium pass
Lusiscaffold8830406980.1 Phenylpropanoid CSE low borderline
Lusiscaffold8850407350.1 Phenylpropanoid CSE medium pass
Lusiscaffold8980410070.1 Phenylpropanoid CSE medium pass
Lusiscaffold9240421960.1 Phenylpropanoid CSE medium pass
Lusiscaffold9240421970.1 Phenylpropanoid CSE medium pass