PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold2170125460.1 Terpenoid MVK low borderline
Lusiscaffold28960180160.1 Terpenoid MVK low borderline
Lusiscaffold2910183370.1 Terpenoid MVK low borderline
Lusiscaffold3550235820.1 Terpenoid MVK low borderline
Lusiscaffold8630402300.1 Terpenoid MVK medium pass
Lusiscaffold8660404450.1 Terpenoid MVK medium pass
Lusiscaffold11860027990.1 Terpenoid PMK high pass
Lusiscaffold11860028000.1 Terpenoid PMK high pass
Lusiscaffold9100416150.1 Terpenoid PMK high pass
LusiC83798310002200.1 Terpenoid TPS medium pass
Lusiscaffold10860013720.1 Terpenoid TPS medium pass
Lusiscaffold11340019040.1 Terpenoid TPS medium pass
Lusiscaffold120030530.1 Terpenoid TPS medium pass
Lusiscaffold1210031910.1 Terpenoid TPS medium pass
Lusiscaffold1210031930.1 Terpenoid TPS medium pass
Lusiscaffold1230037590.1 Terpenoid TPS medium pass
Lusiscaffold1230037610.1 Terpenoid TPS medium pass
Lusiscaffold13080046100.1 Terpenoid TPS medium pass
Lusiscaffold13080046110.1 Terpenoid TPS medium pass
Lusiscaffold13120048000.1 Terpenoid TPS low borderline
Lusiscaffold13130048720.1 Terpenoid TPS medium pass
Lusiscaffold150067990.1 Terpenoid TPS medium pass
Lusiscaffold150068000.1 Terpenoid TPS medium pass
Lusiscaffold150068010.1 Terpenoid TPS medium pass
Lusiscaffold1560078630.1 Terpenoid TPS medium pass
Lusiscaffold16030085570.1 Terpenoid TPS medium pass
Lusiscaffold16030085580.1 Terpenoid TPS medium pass
Lusiscaffold16030085590.1 Terpenoid TPS medium pass
Lusiscaffold1630087240.1 Terpenoid TPS medium pass
Lusiscaffold16710092160.1 Terpenoid TPS medium pass
Lusiscaffold16860092650.1 Terpenoid TPS medium pass
Lusiscaffold16860092670.1 Terpenoid TPS medium pass
Lusiscaffold16860092680.1 Terpenoid TPS medium pass
Lusiscaffold2490141880.1 Terpenoid TPS medium pass
Lusiscaffold2490141920.1 Terpenoid TPS medium pass
Lusiscaffold2490141940.1 Terpenoid TPS medium pass
Lusiscaffold2490141950.1 Terpenoid TPS medium pass
Lusiscaffold2490141960.1 Terpenoid TPS medium pass
Lusiscaffold2510147980.1 Terpenoid TPS medium pass
Lusiscaffold2510148000.1 Terpenoid TPS medium pass
Lusiscaffold2520149030.1 Terpenoid TPS medium pass
Lusiscaffold280168490.1 Terpenoid TPS medium pass
Lusiscaffold280170000.1 Terpenoid TPS low borderline
Lusiscaffold2860179500.1 Terpenoid TPS medium pass
Lusiscaffold2880179930.1 Terpenoid TPS medium pass
Lusiscaffold3100203330.1 Terpenoid TPS medium pass
Lusiscaffold3100203360.1 Terpenoid TPS medium pass
Lusiscaffold3100203370.1 Terpenoid TPS medium pass
Lusiscaffold3530234640.1 Terpenoid TPS medium pass
Lusiscaffold3760248880.1 Terpenoid TPS medium pass