PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold3760248910.1 Terpenoid TPS low borderline
Lusiscaffold4100256780.1 Terpenoid TPS medium pass
Lusiscaffold430272140.1 Terpenoid TPS medium pass
Lusiscaffold500304660.1 Terpenoid TPS medium pass
Lusiscaffold500304670.1 Terpenoid TPS medium pass
Lusiscaffold5470317910.1 Terpenoid TPS medium pass
Lusiscaffold5720324830.1 Terpenoid TPS medium pass
Lusiscaffold5840326610.1 Terpenoid TPS medium pass
Lusiscaffold5840327120.1 Terpenoid TPS medium pass
Lusiscaffold6050335690.1 Terpenoid TPS medium pass
Lusiscaffold670353300.1 Terpenoid TPS medium pass
Lusiscaffold7010362420.1 Terpenoid TPS medium pass
Lusiscaffold7110364790.1 Terpenoid TPS low borderline
Lusiscaffold8580394300.1 Terpenoid TPS medium pass
Lusiscaffold8630400690.1 Terpenoid TPS medium pass
Lusiscaffold8630400700.1 Terpenoid TPS medium pass
Lusiscaffold8630403060.1 Terpenoid TPS medium pass
Lusiscaffold8630403070.1 Terpenoid TPS medium pass
Lusiscaffold870405780.1 Terpenoid TPS medium pass
Lusiscaffold9150417760.1 Terpenoid TPS medium pass
Lusiscaffold100002820.1 Terpenoid UGT medium pass
Lusiscaffold1020004650.1 Terpenoid UGT medium pass
Lusiscaffold10680010600.1 Terpenoid UGT low borderline
Lusiscaffold10720012530.1 Terpenoid UGT medium pass
Lusiscaffold10720012540.1 Terpenoid UGT medium pass
Lusiscaffold10720012550.1 Terpenoid UGT medium pass
Lusiscaffold11200016980.1 Terpenoid UGT medium pass
Lusiscaffold11200016990.1 Terpenoid UGT medium pass
Lusiscaffold11230017440.1 Terpenoid UGT low borderline
Lusiscaffold11430020940.1 Terpenoid UGT medium pass
Lusiscaffold11430022050.1 Terpenoid UGT medium pass
Lusiscaffold11430022170.1 Terpenoid UGT medium pass
Lusiscaffold11430022350.1 Terpenoid UGT low borderline
Lusiscaffold1170025910.1 Terpenoid UGT medium pass
Lusiscaffold1170025930.1 Terpenoid UGT medium pass
Lusiscaffold11860028260.1 Terpenoid UGT low borderline
Lusiscaffold12180034370.1 Terpenoid UGT medium pass
Lusiscaffold1230037980.1 Terpenoid UGT medium pass
Lusiscaffold1230037990.1 Terpenoid UGT medium pass
Lusiscaffold1230038160.1 Terpenoid UGT low borderline
Lusiscaffold1230038170.1 Terpenoid UGT medium pass
Lusiscaffold1230038180.1 Terpenoid UGT low borderline
Lusiscaffold1230038190.1 Terpenoid UGT medium pass
Lusiscaffold1230038210.1 Terpenoid UGT medium pass
Lusiscaffold12470041520.1 Terpenoid UGT medium pass
Lusiscaffold12470041530.1 Terpenoid UGT medium pass
Lusiscaffold12470041540.1 Terpenoid UGT low borderline
Lusiscaffold12470041550.1 Terpenoid UGT medium pass
Lusiscaffold12470041560.1 Terpenoid UGT medium pass
Lusiscaffold12470041570.1 Terpenoid UGT medium pass