PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2937
Candidate Protein Records
2406
Pathway-Level Records
5978
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Lusiscaffold960426730.1 Terpenoid CYP76 low borderline
Lusiscaffold970427840.1 Terpenoid CYP76 medium borderline
Lusiscaffold9770428590.1 Terpenoid CYP76 medium pass
Lusiscaffold9770428650.1 Terpenoid CYP76 low borderline
Lusiscaffold9770430090.1 Terpenoid CYP76 low borderline
Lusiscaffold1230036750.1 Terpenoid DXR high pass
Lusiscaffold27880166510.1 Terpenoid DXR high pass
Lusiscaffold10040003260.1 Terpenoid DXS medium pass
Lusiscaffold10860013750.1 Terpenoid DXS medium pass
Lusiscaffold2060119080.1 Terpenoid DXS medium pass
Lusiscaffold230133750.1 Terpenoid DXS medium pass
Lusiscaffold230133760.1 Terpenoid DXS medium pass
Lusiscaffold2920184780.1 Terpenoid DXS medium pass
Lusiscaffold33450220190.1 Terpenoid DXS medium pass
Lusiscaffold3590236640.1 Terpenoid DXS medium pass
Lusiscaffold5240311840.1 Terpenoid DXS medium pass
Lusiscaffold6040333120.1 Terpenoid DXS medium pass
Lusiscaffold8600400200.1 Terpenoid DXS medium pass
Lusiscaffold8600400210.1 Terpenoid DXS medium pass
Lusiscaffold8600400220.1 Terpenoid DXS medium pass
Lusiscaffold1230036040.1 Terpenoid FPPS low borderline
Lusiscaffold1250042590.1 Terpenoid FPPS medium pass
Lusiscaffold240139130.1 Terpenoid FPPS medium pass
Lusiscaffold270156270.1 Terpenoid FPPS medium pass
Lusiscaffold2800173770.1 Terpenoid FPPS medium pass
Lusiscaffold280169830.1 Terpenoid FPPS medium pass
Lusiscaffold4130259160.1 Terpenoid FPPS medium borderline
Lusiscaffold4650290320.1 Terpenoid FPPS medium pass
Lusiscaffold7010361800.1 Terpenoid FPPS medium borderline
Lusiscaffold7790381540.1 Terpenoid FPPS medium pass
Lusiscaffold820390210.1 Terpenoid FPPS low borderline
Lusiscaffold11680024680.1 Terpenoid GGPPS medium pass
Lusiscaffold1230040480.1 Terpenoid GGPPS medium borderline
Lusiscaffold15360074540.1 Terpenoid GGPPS medium borderline
Lusiscaffold15360074550.1 Terpenoid GGPPS medium borderline
Lusiscaffold15360074560.1 Terpenoid GGPPS medium borderline
Lusiscaffold23240137440.1 Terpenoid GGPPS medium borderline
Lusiscaffold3050196210.1 Terpenoid GGPPS medium borderline
Lusiscaffold380253690.1 Terpenoid GGPPS medium borderline
Lusiscaffold4130259170.1 Terpenoid GGPPS medium borderline
Lusiscaffold4130259180.1 Terpenoid GGPPS medium borderline
Lusiscaffold4130259190.1 Terpenoid GGPPS medium borderline
Lusiscaffold7010361810.1 Terpenoid GGPPS medium borderline
Lusiscaffold7650377540.1 Terpenoid GGPPS medium borderline
Lusiscaffold7650377550.1 Terpenoid GGPPS medium borderline
Lusiscaffold9030414180.1 Terpenoid GGPPS medium borderline
Lusiscaffold980431220.1 Terpenoid GGPPS medium borderline
Lusiscaffold980431500.1 Terpenoid GGPPS medium borderline
Lusiscaffold420266650.1 Terpenoid GPPS low borderline
Lusiscaffold10370008220.1 Terpenoid HDR/IspH high pass