PlantSME Plant secondary metabolism enzyme database

Linum usitatissimum (linum_usitatissimum)

Imported from atlas release summary for Linum usitatissimum.

2406
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 720 20 BAHD (265) View species results
Alkaloid pathway 546 26 7DLGT (120) View species results
Phenylpropanoid pathway 492 12 POD (211) View species results
Flavonoid pathway 313 11 UFGT (198) View species results
Rosmarinic acid pathway 219 7 C4H (89) View species results
Steroid pathway 116 12 CAS (42) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2315 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 459 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Gene Pathway Family Confidence Status
Lusiscaffold1590083410.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold1630086610.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold1770098160.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold1830103170.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold1840103630.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold20113080.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold2080119950.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold2090120950.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold2120122820.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold2170125050.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold2170125320.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold2300135190.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold23030135890.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold240139120.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold240139130.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold250146460.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold2510147590.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold2800173060.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold2840178340.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold2910181910.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold2910181980.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold2910182530.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold2920185010.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold300191540.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold300192190.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold300192200.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold300192210.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold300192280.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold300192300.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold300192320.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold3100205530.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold310200660.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold310200670.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold310200680.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold310200700.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold310200730.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold310201300.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold310201920.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold3250214090.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold3460229400.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold3490230660.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold3490230670.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold3490230790.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold3490231380.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold3580236560.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold3590236800.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold3630241390.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold3720244600.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold3730246060.1 Steroid BR6OX2/CYP85A2 low borderline
Lusiscaffold3770252190.1 Steroid BR6OX2/CYP85A2 low borderline